Gene VIBHAR_04882 details

Gene Information

• Locus tag: VIBHAR_04882
• ID: 5558279
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 151231
• End bp: 151935
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640909361
• Product: histidine utilization repressor
• Protein accession: YP_001447017
• Protein GI: 156976111
• COG category: [K] Transcription
• COG ID: [COG2188] Transcriptional regulators
• TIGRFAM ID: [TIGR03337] transcriptional regulator protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAATACG TAAAAATTAA AGATTCGATT GTTGAACAGA TTGAAGCGGG CATGCTATCG 
CCGCGTCAAA AACTGCCAGC AGAGCGTAAG TTGGCGGAGT CGTTCGATAC TACACGCGTC 
ACTTTGCGTG AAGCTTTATC ACTGCTGGAA GCAGAAGGTC GAATCTATCG CGAAGATCGC 
CGAGGTTGGT TTATCTCACC TGAGCCATTG CGTTACGACC CTACCCAAAC GCTGAACTTC 
CCGAACATGG CGAAAGCGCA AAATCGCGTG CCAAAAACGG AGTTGGTCGC AGCAAAAGGG 
ACGTTGGCAA ACAAACAAGC CGCGCGCTTG CTGGACTTGC AACCTTTCTC GGACGTGTAT 
CGAGTCGACC GTGTTCGATA TCTTGAAGAC AGACCAGTAG TATTCGTAAC AAACTACATT 
CGCCCAGAGC TGTTTCCGAA CCTGCTGGAC TACGATTTAT CAAATTCACT GACGGATATT 
TATCGCGATC ATTATGGAGT GACGTATCAA AAGATTCGCT ACCGCATTTC AACCAGCACT 
TTGTTGGGTG AAATGGCTCA GGCACTGCGC GCGACAGCTG GCACTCCCGC GATGGTGGTG 
GAGCGCATCA ACTATAACCA GCACGGTGAG TTGATTGATT GCGATATCGA GTATTGGCGA 
CACGATGCCA TCAGCATTGA ATCTCTGGCG GAACTCAATC GTTAA 

 

Protein sequence

MQYVKIKDSI VEQIEAGMLS PRQKLPAERK LAESFDTTRV TLREALSLLE AEGRIYREDR 
RGWFISPEPL RYDPTQTLNF PNMAKAQNRV PKTELVAAKG TLANKQAARL LDLQPFSDVY 
RVDRVRYLED RPVVFVTNYI RPELFPNLLD YDLSNSLTDI YRDHYGVTYQ KIRYRISTST 
LLGEMAQALR ATAGTPAMVV ERINYNQHGE LIDCDIEYWR HDAISIESLA ELNR