Gene VIBHAR_04842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04842 
Symbol 
ID5557736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp108367 
End bp108981 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID640909321 
Producthypothetical protein 
Protein accessionYP_001446978 
Protein GI156976072 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTA ACTGGTCTCT TTTTCTCGTG GTTGCTTTCG TTCTCGGCTT TGGTACTAAA 
ACGTATCTAG ACGGCCAAAA AGAGGTAGAG AAAAAACCGC AACAAGTCGC TACCGAACAA 
AGCGTGCTGT TTGGCGAAGG CGATAAACCT GTCGATATCT TCGACACTAG TGATGATCGA 
ATTCGTATTG TTTACTTTGG CTTTACGCGC TGCCCAGATG TGTGCCCAAC CTCATTAGCC 
ATGCTAGCCG GCGCTCTCAA CCAAATCGAC GATGCACAAA AAGCACAGTT GCGTCCGATG 
TTCATCTCAC TTGATCCGGA ACGCGACGAA GCAGATGCAT CCGCTAAGTA CGCCCATTAC 
TTCCACCCAA TGATTGAAGG TCTGTCAGCG CCACTTGATG TGACCACCCC ACTTGCTCAT 
AAGTACGGTG TCATTTTCCG TAAAACAGAG CTTGAAGGCT CGGAGCTGAA ATACACACTC 
GACCACAGCT CTTACTTCTA TTTCTTGAAG CCTAACGGCA CACTTATCAC AAAAGTGCCG 
CATACCTTAA CGCCTGCGCC AATTGTCGAG GCAATAACCA AACTGACTGC AGAAGGAAAA 
ACCAATGAAA GCTAA
 
Protein sequence
MSRNWSLFLV VAFVLGFGTK TYLDGQKEVE KKPQQVATEQ SVLFGEGDKP VDIFDTSDDR 
IRIVYFGFTR CPDVCPTSLA MLAGALNQID DAQKAQLRPM FISLDPERDE ADASAKYAHY 
FHPMIEGLSA PLDVTTPLAH KYGVIFRKTE LEGSELKYTL DHSSYFYFLK PNGTLITKVP 
HTLTPAPIVE AITKLTAEGK TNES