Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04833 |
Symbol | |
ID | 5556591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 98818 |
End bp | 100998 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909312 |
Product | ornithine decarboxylase |
Protein accession | YP_001446969 |
Protein GI | 156976063 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TAATTATCGG TGTTAGTAAT TACATGCCAG AAGACTTCAG TTTATTATCT GAATCTTTGG ATGAGCAATT TAACCGAACT TTAAAACCAC TTGAGCACGT CGAATTAACC GACGTTGGCG CTGCAATTAT TACTTCTGCA GATATTAAGG CTGGTCTACA CAAAATTATT TCTGAAACGG GTTATGGCAT TCCGGTTTTC TTAGTAACAG ATGAAAACCC AGTTTCAGCA GAAGATTACG TATGGTTAAC CGGCGTTATC GATTTGGAAA GACAGTCAAT TGAATACTAC GGTCGCCAAA TCAATGAGGC TGTCACCAAA TACGAATGTC GCTTACTTCC ACCGTTCTTC AAACAATTGA CTCACTACGT GGAAATGGGC AACTCTGCAT TCGACTGTCC AGGACACCAA GGCGGTCAGT TCTTCAAAAA ACACCCAGCA GGTAAACAGT TCTACGATTT CTTCGGTGAA AACCTATTCC GTAGTGACTT GTGTAACGCG GACGTTGATT TAGGTGACTT GCTGATCCAC GAAGGTTCTG CTCACCAAGC TCAAGCGCAC GCAGCAAAAG TGTTCAACTC AGACAAAACC TACTTCGTAC TCAACGGTAC TTCGGCTTCA AACAAAGTGG TTTGTAACGC GCTAGTGACC GAGGGTGACT TGGTGATGTT TGACCGTAAC AACCACAAAT CAAACCACCA TGGCGCATTG ATCCAAGCGG GCGGTATGCC AGTTTACCTA GAAACGGCAC GTAACCCTTG GGGCTTTATC GGTGGTATGG ATGAGCACTG TTTTGATGAA GAATACATCC GTGCTCAAAT CGCAAAAGTG TCACCAGAGC GTGCTCGTGA TGAACGCCCA TTCCGTCTTG CGATCATCCA ATTGGGTACT TACGACGGTA CCATCTACAA CGCACGTTAC GTGATGGATA AGATTGGTCA TCTATGTGAT TACATCCTAT TTGACTCGGC ATGGGTGGGC TACGAGCAGT TCATTCCTAT GATGAAAGAC TGTTCTCCGC TGCTACTGGA TCTGAAACCA GAAGATGCGG GTGTGATCGT GACTCAGTCT GTTCACAAAC AACAAGCTGG CTTCTCTCAA ACCTCGCAGA TCCACAAAAA AGACCACCAC ATCAAAGGTC AGGCTCGCTA CTGTAACCAC AAACGCTTCA ACAACGCGTT TATGATGCAC GCGTCAACTT CACCATTCTA CGCGCTGTTC TCAGCATTGG ATGTGAACGC GAAGATCCAC GATGGTGAAG CGGGTCTGCG CCTATGGCGT GATGCGGTTA AGACAGGTAT CGAAGCACGT AAAGAAATCC TGAAAAGCTG TGAGCTGATT CGTCCGTTCA TTCCTGACCA AGTGGATGGT CAACCATGGG GCAGTTACGA CACCGATCTT ATCGCAACCA ATAAGAAGTT CTTCATGTTC GAGCCAGACG CAAGCTGGCA TAAATTTGAA GGTTACGGCG AAGGTCAGTA CTTCGTTGAC CCATGTAAAT TGCTACTCAC CACAGCAGGA ATTGCTGAAG ATGGTAGCTA CGCAGACTTT GGTATTCCTG CAACGTTATT GGCTAACTTC CTACGTGAGA ACGGCATCAT CCCTGAGAAG TGTGACTTGA ACTCTATCTT GTTCCTTCTC ACTCCAGCAG AGGACATGGG TAAGATCCGT CATCTTGTGG CGCAAATTAA CCGCTTCGAA AAATTCATTC GTGATGACGC GCCGCTAAAC ATCGTGCTTC CTCGCGTTTA CGAGGCGAAT AAAGAGCGCT ACCGCGGCTA CACCATCCGT CAGCTATGTC AGGAAATGCA TGACATGTAC AAAGAGCTGA ACGTGAAACA GCTACAAAAA GCGATGTTCC GTAGCGAATA CTTCCCAACC ATGGTGCACA AACCAGATGT GGCAACACGC AAATACTTCC GCGGCGAGTG TGATTACTTG CCTCTGAAAG AAGCGGTAGG TCGTGTCGCA GCAGAAGGTG CGCTTCCTTA CCCTCCAGGC ATTATCTGTG TGATCACGGG CGAAATCTGG ACTCAACAAG TGGTCGATTA CTTCTTATCT CTAGAAGAAG GCATCAACCG ATTCCCAGGC TTCGCACCAG AGATTCAAGG TGTGTACCTA GAAGACGTCA ATGGCCGCAC CACCGCCCAT TGCTACGCCC TTAAAGATTA A
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Protein sequence | MKRLIIGVSN YMPEDFSLLS ESLDEQFNRT LKPLEHVELT DVGAAIITSA DIKAGLHKII SETGYGIPVF LVTDENPVSA EDYVWLTGVI DLERQSIEYY GRQINEAVTK YECRLLPPFF KQLTHYVEMG NSAFDCPGHQ GGQFFKKHPA GKQFYDFFGE NLFRSDLCNA DVDLGDLLIH EGSAHQAQAH AAKVFNSDKT YFVLNGTSAS NKVVCNALVT EGDLVMFDRN NHKSNHHGAL IQAGGMPVYL ETARNPWGFI GGMDEHCFDE EYIRAQIAKV SPERARDERP FRLAIIQLGT YDGTIYNARY VMDKIGHLCD YILFDSAWVG YEQFIPMMKD CSPLLLDLKP EDAGVIVTQS VHKQQAGFSQ TSQIHKKDHH IKGQARYCNH KRFNNAFMMH ASTSPFYALF SALDVNAKIH DGEAGLRLWR DAVKTGIEAR KEILKSCELI RPFIPDQVDG QPWGSYDTDL IATNKKFFMF EPDASWHKFE GYGEGQYFVD PCKLLLTTAG IAEDGSYADF GIPATLLANF LRENGIIPEK CDLNSILFLL TPAEDMGKIR HLVAQINRFE KFIRDDAPLN IVLPRVYEAN KERYRGYTIR QLCQEMHDMY KELNVKQLQK AMFRSEYFPT MVHKPDVATR KYFRGECDYL PLKEAVGRVA AEGALPYPPG IICVITGEIW TQQVVDYFLS LEEGINRFPG FAPEIQGVYL EDVNGRTTAH CYALKD
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