| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04828 |
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| Symbol | |
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| ID | 5556613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 91478 |
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| End bp | 95464 |
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| Gene Length | 3987 bp |
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| Protein Length | 1328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640909307 |
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| Product | pullulanase |
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| Protein accession | YP_001446964 |
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| Protein GI | 156976058 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAATA AAACATTTAA ATTATCAGCG ATCGCCAAAA CCGTTCTGCC TTTGATTTCC
GTAGCGGTTA TCAGCGGTTG TGGCAGTGAT AGCTCTAGCG ATGACACAAC GAACCCGGGC
TCTGGCCTAC ACCCTGCGGG AGAGAACGAA GTTGTCATCT ATTACAAACG TGACGTCGCA
ACAGCTTCAA CAGCAAGCGA CTACGAAGGT TGGGGTCTGC ACCTTTGGAA TGGTGAAGGT
TGTACCAGTA CAGACCTAGA AGCAATGGGT ATTGCTGACG GTGGTACAGA CTGGGCATCA
CCACTTCCAT TCGATGGCAT CAGCGACACT TACGGTGCGT ACTTCGTGCT CAAAGTTGAC
CCAGATGCGT CTGACCCACA CAACTGTATG AACTTCATCC TACACAAAGG CGACGAAAAA
GCCTTCGGCA GTGGCAATTC AAAAGTGGAA CTGACCAAGC TAGGTGAATC ACAAGGTCTA
TTCGGCTTCC ATGGCAGCAG TGAGCTTTAC TACGAGCCAA TCGAAGAACG TCCAGTAGAC
ATCGATGGCC AAAAAGCCCA TTGGTTAGAC GCTGAAACCA TCGCTTGGGA AGCGGCAGGT
AGCGCTGACT CAATGAAGCT TTACTACAGC TTGACCAATG ACATCAAGAT GGATGAAGAC
AAGCAAATCA CTGGCGGCAC AGCGGTTGAG CTGACAAAAG CTGGCGACTT GTCTGATGAA
CTAAAAGAGC GCTTCCGTCA CCTTGCTAGC CTGCAAGCTG CGTGCATCGA CGTGGATGCA
GAAACACTTC GTACGATTTT GAAATCTCAA ATCGTGATGG TCGCTTACAA TGCCGATGGC
GATGTGACTT CAGCTACTGA AGTACAAAAA CCAGGCGTGC TTGATGCCGT ATTTGCAGAT
GAAGATGCAG GTAATGCAAT CAGTGAAGAG TTGGGCGCAA TTGTTGAAGG TAGCGCGGCT
ACATTCAAAC TTTGGGCACC AACCGCGCAA GACGTTGACC TAATCATCTA CGATGCGAAC
TTTGCAGAAG AAGCGACAGT TGCAATGACT GAGAACCCAG AAACAGGTAT CTGGGAATCA
GAAGCACAAG GCAACGTACT GAACAAGTTC TACCGTTACC AAGTGAAGGT TTACCACCCG
ACGACTGGTG TTGTTGAAAC TCGCCTTGTA ACTGACCCTT ACTCGCTAAG CTTGTCGCAA
AACTCAATGT ACTCACAAGT TGTCGATCTA GACAGCGCTG CGTTGAAGCC AGCAGAGTGG
GATAACTACG ACCGCCCAAC GGTTGCAAAA GATGAAGACC ACGTTCTTTA CGAATCACAC
CTTCGTGACT TCAGCTTTAG CGATACTAAA GGCATGCAAT CTCTAAACGG TAAGTACCTA
GCACTGACAG AGACTGAGCG TGAGTCGGTT ACTCACCTTC AAGCACTGAA AGACGCAGGT
CTAACGACAC TTCACATTCT GCCAGCGTTC GATATTGCAA CGGTTGACGA AAACGCAGCA
AACCGAGTTG ATATCACAGA TACCGTAGGC AAGCTATGTG ACATCAAACC AGCGGCTTCA
ATCTGTGAAA CAGAAGACGA CGCTAAAATC ATTGAAGATG TACTAAACAG CTACGATCCA
GCAACGGGTG CAGCACAAGC ACTGATGAAC GATCTACGCA TGCTAGACAG CTTCAACTGG
GGTTACGACC CATTCCACTA CACTGTTCCA GAAGGCAGCT ACGCGACCGA TCCAAACGGT
TCTAAACGTA TCCTTGAATT CCGTGAAATG GTTCAAGCGA CACACAAAAT GGATCTCAAG
CTGGTTATGG ACGTAGTGTA CAACCACACT AATGCATCGG GCGTAAACGA AAAATCTGTC
CTAGATAAGA TCGTCCCTGG ATACTACCAC CGTCTAAATG TGAACACGGG TGGCGTTGAG
AACTCAACTT GTTGTGACAA CACAGCAACT GAGAACTTGA TGATGGGTAA ACTGATGGTT
GACTCATTGC TTGTGTGGGC GGATGACTAC AAAGTTGACG GCTTCCGTTT TGACTTGATG
GCACACCAAC CAAAAGACGT GATGGAATAC GCTCTGGAGC GCGTTAAACA AGTCGATAAA
AACACGCTAT TCTACGGTGA AGGTTGGGAC TTCGGTGAAG CAGCAAACAA CGCTCGCTTC
GACCAAGCAA CACAAATCAA CATGGCTGGC ACTGGCATCG GTACCTTCTC TGACCGTCTA
CGTGACGCGG TTCGTGGTGG TAGCCCATTC GATGGCGGTG TGGACTCTGA AGGTAAGCAC
CCACTTCGCT TTAACCAAGG TTTTGGTAAC GCAGGTTACC CGAACGAAGA AACGAAGACG
GATGCAGAAG CGGTAAACGG TCGTCTACAC AACCAAGACT TAGTACGTCT GGGTATGGCA
GGTAACCTAG CAGAATTCGT TCTTCTAGAC TTCGAAGGTG AAACTAAACT TGGTAAGAAC
GTAGACTACA ATGGTGCGCC AGCGGGTTAC ACTAAGATCC CTTCTGAGAA CATCTCTTAC
GTATCTAAGC ACGACAACCA AACGCTATGG GACAACAACG CGTACAAGAT CGCGACTGGC
ACTTCATCTG CTGACCGCGC ACGTATGCAA ACTGTGTCTC TATCTACGGT AATGCTTGGT
CAAGGTATCC CGTTCATCCA TATGGGTTCT GAGCTACTGC GTTCGAAATC AATGCAGCGT
GACTCTTACG ATTCAGGTGA CTGGTTCAAC CGCGTTTACT TCGACGGTAG CGACAACAAC
TGGAACGTTG GTCTACCTCG TGAAGACAAA GACGGCGCAA ACTGGGAGTT GATCAAAACT
ATCGTTGCTG ACAGCACTGC GATGCCAAAC ACTGACGATA TCGAGCTAAC TAAGCAACAA
TTCCTAGAAC TACTGACTAT CCGTAGCTCA AGCGAACTGT TCCGTTTAGA TACTGCTCAA
GAAGTCATGA ACCGCGTTGA CTTCCGCAAC GTAGGCAAAG ACCAAGTGGA AGGCTTGATC
GTCATGTCTA TTGATGACGG TGTATCAGCA GGTAAAGATC TTGATACCAA CTACGATGCA
ATCGTGGCAG TAGTGAACTC AACATCAGAA ACGAAATCGT TCAAAGTTGA AGGGGCAACT
GGCTTCGAAC TGCATGAAGT TCAAAAAGAC TCTGCAGATA GCCGTGTGAA AGGCGCAAGC
TTCTCAGGCG AAACCTTTAC GGTTCCAGCA CTAACAACAG CGGTATTTGT TCAACCACAA
AACGGCGCTC AAGGTGCAGG TCTACCAGTA AACACTGATA ACAAAGACGT ATCGAGCATT
CCTCCTTACG GTGAAACAGT CGTTTACGTT AAGGGTACAA TGAACGATTG GTCGGACAAC
AGTGACTGGG CAATGAACTT CATCGGCAAC GGCATGTACT CTGTAACTGG CGTTCTTGAA
GCTGGTGAGC ACGAGTTCAA ATTTGCGGAC TCTGGCTGGG CAAATCCAAA CATTGGTTGT
GATGCGGCAG AGCAAGCGTC TGGTTCACTA GATTTAGGCT CAGAAGGTAA CTGTAAGTTG
TCAGTTGTTG AAACAGGTAA GTACAACTTC ACTCTGAACG CACTACACGC TCAAGATGAA
AGTGTAGAAA AGCCAGTTGT ATCAGTGACT AAATCAGCGG ATGCACCAAC GTTCGGCGAA
ACAGCACTGT ACCTACGTGG TGATGTAACC GATGCAAGCT GGGCGGCACT AGAGACAGCA
AAATTCGGTT ACGTTGCGAA TGATGTTTAC TCTTTAGACA TCGATCTAAA AGCGGGCACA
TTCGATATGA AAGTAGCGAG CTCTGACTGG GCAGATGCAA CCAACTTTGG TGGTCAAGGC
GCGATTGAAT TTGGCACACC ACTGACTATG GAAGCGGGTG GCTCAAGTGG CAACATCAGC
ATCACACTAG CAGAAGATGG AAACTACAAC TTCCACTTCA ACGCAGCGGA TAAAGCCGCG
CCAATCGTGA CGGTGACTCA GAACTAA
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| Protein sequence | MNNKTFKLSA IAKTVLPLIS VAVISGCGSD SSSDDTTNPG SGLHPAGENE VVIYYKRDVA
TASTASDYEG WGLHLWNGEG CTSTDLEAMG IADGGTDWAS PLPFDGISDT YGAYFVLKVD
PDASDPHNCM NFILHKGDEK AFGSGNSKVE LTKLGESQGL FGFHGSSELY YEPIEERPVD
IDGQKAHWLD AETIAWEAAG SADSMKLYYS LTNDIKMDED KQITGGTAVE LTKAGDLSDE
LKERFRHLAS LQAACIDVDA ETLRTILKSQ IVMVAYNADG DVTSATEVQK PGVLDAVFAD
EDAGNAISEE LGAIVEGSAA TFKLWAPTAQ DVDLIIYDAN FAEEATVAMT ENPETGIWES
EAQGNVLNKF YRYQVKVYHP TTGVVETRLV TDPYSLSLSQ NSMYSQVVDL DSAALKPAEW
DNYDRPTVAK DEDHVLYESH LRDFSFSDTK GMQSLNGKYL ALTETERESV THLQALKDAG
LTTLHILPAF DIATVDENAA NRVDITDTVG KLCDIKPAAS ICETEDDAKI IEDVLNSYDP
ATGAAQALMN DLRMLDSFNW GYDPFHYTVP EGSYATDPNG SKRILEFREM VQATHKMDLK
LVMDVVYNHT NASGVNEKSV LDKIVPGYYH RLNVNTGGVE NSTCCDNTAT ENLMMGKLMV
DSLLVWADDY KVDGFRFDLM AHQPKDVMEY ALERVKQVDK NTLFYGEGWD FGEAANNARF
DQATQINMAG TGIGTFSDRL RDAVRGGSPF DGGVDSEGKH PLRFNQGFGN AGYPNEETKT
DAEAVNGRLH NQDLVRLGMA GNLAEFVLLD FEGETKLGKN VDYNGAPAGY TKIPSENISY
VSKHDNQTLW DNNAYKIATG TSSADRARMQ TVSLSTVMLG QGIPFIHMGS ELLRSKSMQR
DSYDSGDWFN RVYFDGSDNN WNVGLPREDK DGANWELIKT IVADSTAMPN TDDIELTKQQ
FLELLTIRSS SELFRLDTAQ EVMNRVDFRN VGKDQVEGLI VMSIDDGVSA GKDLDTNYDA
IVAVVNSTSE TKSFKVEGAT GFELHEVQKD SADSRVKGAS FSGETFTVPA LTTAVFVQPQ
NGAQGAGLPV NTDNKDVSSI PPYGETVVYV KGTMNDWSDN SDWAMNFIGN GMYSVTGVLE
AGEHEFKFAD SGWANPNIGC DAAEQASGSL DLGSEGNCKL SVVETGKYNF TLNALHAQDE
SVEKPVVSVT KSADAPTFGE TALYLRGDVT DASWAALETA KFGYVANDVY SLDIDLKAGT
FDMKVASSDW ADATNFGGQG AIEFGTPLTM EAGGSSGNIS ITLAEDGNYN FHFNAADKAA
PIVTVTQN
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