Gene VIBHAR_04813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04813 
Symbol 
ID5557385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp74672 
End bp75769 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID640909292 
Producthypothetical protein 
Protein accessionYP_001446949 
Protein GI156976043 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTGA TGATGAAAAA GTCGACCCTT TCTGCAGTGA TTTTAGCAGC GCTTACTTCT 
AGCTCAGCCT TTGCTGCACA CACTTTTATT AATGACGCTG GCGACAGCCT AACCATCGAT 
GGCCGTTTCG ATCTTCGCTA CCAAGACCGT GGCGGTGATG ACAACGGCGA ATGGAACAGC 
GGCAGCTCAC GTTTCGGTTT GAAAGGCCAA ACGGATCTGG ATAACGGCTG GACTGGTTTC 
GGTCACGCGG AATGGGGCTA CAACTCTGGC GCAAACGGCG ACAACATTTA CGACCGCTTG 
CTATACGCAG GTGTTGATCA CGAAAAATAC GGCAAGATTG CTGCGGGTAC AAAGCAGTGG 
TCTACCTTCT ACGACGTAGC ATGGTACACC GATTTAGGTC GTGTATTCGG TACTCGTGGC 
TCAGGTGTTT ACAACCTAGC TGACTGGGGT ATCGCATCCG GTGCTGGTCG TGCAGAAAAC 
TCAATTACGT ACCGTAATTC AATCAATGAA AAAGTGGGCT ATGGCTTTAC TTACCAAACC 
ACGCGTGAAG ATGTTGCTCT AGCTAACAAT GCAACAGCAT CACTGAAAAA CGGTATGGGT 
GCGTCGATCA CTTACAAACC GGTTGATGGC GTAACACTTG GTGCGGCTTA CCATCAAAAT 
GAAGTTGCGG ATCTAGACGC AAGCGTGGTT GGCGTAGAAA ACGGCGACAA CATGCGCATC 
ATGCTATTGG GCGCGAACTA CAGCAACGGT GGTTTCTACG CGGGCGCGAC TTTCCACGTT 
GGTGAAAACT GGGAAGCAGT AAGCCAAAGC GGTACGGACG TGATGTTCGA TACCCTGGGT 
GGTGAAATCT ACACTTACTA CCACTTCGAC AACGGCCTAC GCCCAACATT GAACTACAAC 
TACATGGAAG ATCGTGGTGA CGAGACACAA GGTTACGAGC GTAACTTGCT GATTCCTGGC 
CTTGAATATC ACTTCCAAAA GAACAAATTC CTAGTTTGGA CTGAATACCA GTTCGATCTA 
GGTAAAGATC AGTACGATGG CAGCAAATTC GAAAACCGTG ATGATCAATT CGCGGCAGGT 
ATTCGCTACT ACTTCTGA
 
Protein sequence
MRLMMKKSTL SAVILAALTS SSAFAAHTFI NDAGDSLTID GRFDLRYQDR GGDDNGEWNS 
GSSRFGLKGQ TDLDNGWTGF GHAEWGYNSG ANGDNIYDRL LYAGVDHEKY GKIAAGTKQW 
STFYDVAWYT DLGRVFGTRG SGVYNLADWG IASGAGRAEN SITYRNSINE KVGYGFTYQT 
TREDVALANN ATASLKNGMG ASITYKPVDG VTLGAAYHQN EVADLDASVV GVENGDNMRI 
MLLGANYSNG GFYAGATFHV GENWEAVSQS GTDVMFDTLG GEIYTYYHFD NGLRPTLNYN 
YMEDRGDETQ GYERNLLIPG LEYHFQKNKF LVWTEYQFDL GKDQYDGSKF ENRDDQFAAG 
IRYYF