Gene VIBHAR_04773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04773 
Symbol 
ID5557113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp40514 
End bp41146 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content48% 
IMG OID640909252 
Productisochorismatase 
Protein accessionYP_001446909 
Protein GI156976003 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTGT GCGGCGAATC ATCGGCACAA TACACCCATC AGCAACAGAC AAAACAAAGA 
GAGAGAAGAA TGTCTAAAAC TGCATTGTTA TTGATTGATT TTCAAAACGA CTACTACCCA 
AGCTACTCAG GTGCAAAATG GCCACTGTCA GGCACAGAAG AGGCGGCAGA GAACGCAGCA 
CAACTGCTTG AAGCATTTCG CCAAAAAGGG TTACCCGTTG TGCACGTAAG ACACGAGTTT 
CCAACAGAGG AAGCGCCGTT CTTCCTACCT AATTCTGAAG GTGCGCAAAT TCACTCAAGT 
GTCGCACCTA TCGAAGGTGA GGCTGTGGTG CTAAAGCATC AAATCAACAG CTTTCGAGAT 
ACGGATTTGA AAGCCATTCT TGATGATGAG AATGTCACGA GGTTGGTGAT CGTTGGAGCG 
ATGAGCCACA TGTGTATTGA TGCAGTCTCA CGTGCCGCCG TAGATTTAGG GTATGAATGT 
CACGTCGCTC ACGACGCTTG TGCGACGCTA GACTTAGAAT TTGATGGCGT GAAAGTACCA 
GCCAAGCAAG TGCATGCCGC ATTTATGGCA GCGCTAAGCT TTGGTTACTG CAACGTAGAC 
AGCTCAGTAA AACTGCTCGA GTTAGCGAAC TAA
 
Protein sequence
MGVCGESSAQ YTHQQQTKQR ERRMSKTALL LIDFQNDYYP SYSGAKWPLS GTEEAAENAA 
QLLEAFRQKG LPVVHVRHEF PTEEAPFFLP NSEGAQIHSS VAPIEGEAVV LKHQINSFRD 
TDLKAILDDE NVTRLVIVGA MSHMCIDAVS RAAVDLGYEC HVAHDACATL DLEFDGVKVP 
AKQVHAAFMA ALSFGYCNVD SSVKLLELAN