| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03698 |
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| Symbol | |
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| ID | 5554831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3734442 |
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| End bp | 3736076 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640909177 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446839 |
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| Protein GI | 156975932 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAT TAGTTGTAGG AATCGTGATT GCTTCCTTAA TGGGTTGTTC TATGGGTCAC
CGTGACCCGG TAGAAGTGAA GCAAGTACTT AATGAATCTA TCAATGAAGC AAACAGTCGT
GCACTAGAAG ATATCCCGTC TTCTGTGCAA GCCGATCTTA TGCCGAATCT AGACTCAAAC
GTGTCTTCAA AAGAAGGGAC TTTGAAGCGT TTTCGAGTTC AAGCTAACGC GGTTGAGGCG
CGTAGCTTCT TTGCTTCTTT AGTGAAAGGT ACAGAATACA GTGTGGCAAT CCATCCTGCG
GTGCAAGGTA ACATCACCGT TGACCTTTCT GATGTCACAT TGGACGAAGT ACTGAATGTT
GTGCAGAACA TGTACGGCTA TGACGTAGTG AAGTCAGGTA AGGTGATTCA AGTTTACCCT
GCTGGTATGC GTACCGTGAC GATTCCTGTG GATTACCTTC AGTTCAAGCG TTCTGGTCGT
TCATTGACAA GTATCGTCAC TGGCTCTGTA ACGTCGGCTG GTACCTCTAA TTCTGGTGGT
GGCTCTGATG ACTCTGACTC ATCAGACTCA AACAACAATA ATGGTGATGG CTCTACGACA
TCAACCGGCG GTACTCGTAT TGAGACCATT ACTGAAAGTG ATTTCTGGCC AATGCTGCAG
CAGGCGGTTG CTAACCTGAT TGGTTCAGGC AAAGGTCAAA GCGTTGTTGT TACACCGCAA
GCTGGTGTGA TTACTGTACG TGCCTTCCCT GATGAGATTC GCGAAGTTCG TGAGTTCTTG
GGTGTGTCGC AAGAGCGCAT GCAGCGTCAA GTAATACTCG AAGCGAAGAT CTTAGAAGTA
ACATTGAGCG ACGGCTATCA ACAAGGTATC AATTGGTCAA ATATGTCTGC CTCCATCGGT
AACTCGGGCA GTATTTTGGT TGATCGTAAT CCAGCTAAGC TGCCTCTAGA TGCTATCGGC
ACTCTTCTAG GTGGACAAAC GAATGTAACC TTCTCCGACG GTAACTTTGA AGCTGTGATG
AGCTTTATGG CGACACAAGG TGACCTAAAC GTACTTTCTA GCCCTCGTAT TACCGCCGCG
AACAACCAGA AGTCCGTCAT CAAGGTGGGT ACTGATGAGT ACTTCGTAAC TGAGCTTTCT
AGTAACGCTG GTAACGGTGA GAACTCGAAT GCTGTTCCTG AAGTCGAACT GACGCCTTTC
TTCTCTGGTA TTTCTCTGGA TGTAACGCCG CAAATCGATA ACAAAGGCAA CGTGTTCCTA
CATGTTCACC CTGCGGTTAT TGAAGTAGAA GAAGAGATTA AACAGCTAAA CCTTGGTGGT
GATTTCCAAA ACATTCAGTT ACCACTGGCG AAAAGCTCCA TTCGTGAGTC TGACTCGGTG
ATCCGTGCCA AAGATGGTGA TGTGGTTGTG ATTGGTGGTT TGATGAAGCA GCAAAACCTA
GAGCAAGTAT CGAAAGTGCC TTTCCTAGGT GATGTACCTG CGCTGGGTAA TTTGTTCCGT
AACATCAATA ATGTGACGCA AAAAACAGAG CTGGTTATTT TGCTTAAACC AACCGTTGTT
GGCGTGAACA CATGGCAGAA AGAGCTAGAG CGTTCACGTG ATTTGCTACA AGAGTGGTTC
CCTGACGCTG AGTAA
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| Protein sequence | MRKLVVGIVI ASLMGCSMGH RDPVEVKQVL NESINEANSR ALEDIPSSVQ ADLMPNLDSN
VSSKEGTLKR FRVQANAVEA RSFFASLVKG TEYSVAIHPA VQGNITVDLS DVTLDEVLNV
VQNMYGYDVV KSGKVIQVYP AGMRTVTIPV DYLQFKRSGR SLTSIVTGSV TSAGTSNSGG
GSDDSDSSDS NNNNGDGSTT STGGTRIETI TESDFWPMLQ QAVANLIGSG KGQSVVVTPQ
AGVITVRAFP DEIREVREFL GVSQERMQRQ VILEAKILEV TLSDGYQQGI NWSNMSASIG
NSGSILVDRN PAKLPLDAIG TLLGGQTNVT FSDGNFEAVM SFMATQGDLN VLSSPRITAA
NNQKSVIKVG TDEYFVTELS SNAGNGENSN AVPEVELTPF FSGISLDVTP QIDNKGNVFL
HVHPAVIEVE EEIKQLNLGG DFQNIQLPLA KSSIRESDSV IRAKDGDVVV IGGLMKQQNL
EQVSKVPFLG DVPALGNLFR NINNVTQKTE LVILLKPTVV GVNTWQKELE RSRDLLQEWF
PDAE
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