Gene VIBHAR_03678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03678 
Symbol 
ID5555357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3710079 
End bp3711524 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content50% 
IMG OID640909157 
Producthypothetical protein 
Protein accessionYP_001446819 
Protein GI156975912 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAA ACCAAATAGA ACAGGCACTC CTTGCCCCAA ACGGTCTGAC AGAGCAAGAC 
ATCGCTGACA CACTAGCGAG CATTGCGACG CGCCAGATCG ATTATGCGGA CATTTACTTT
CAGTCCAGCT GGCACGAGTC TCTGGTTCTA GAAGACAGCA TCATTAAAGA TGGCTCTTTC
AATATTGACT GTGGTGTCGG TGTACGAGCA GTCACAGGCG AAAAAACCGG TTTCGCCTAT
TCAGACCAAA TTCAACTAGA CGGTTTGAAG CAAAGTGCTA TTGCCGCGCG TGGTATTGCG
CAGCAAGGCC AAAATGGCAA AGTGCATGCA TTCAAACGTT CTGATAACCA AGCTTACTAC
GATGCGGTAA ACCCATTAGC AAGCTGGGAA AAGCAACAAA AAACCGAACT GTTGTTGTCT
CTGGACGCGT ATATCCGTAC CAAAGAGCCA CTCATCAAAG AAGTATCTAT CAGCATCAGC
GGTGTGCATG AGCAAATGTT GGTTGCTGCA ACCGACGGTA CTTACGCTGG TGACATTCGT
CCGCTTGTCC GTCTATCAAT CAGTGTTCTT GCTGAAAAAG GCGATCGCCG TGAACGCGGT
AGCGCTGGTG GCGGTGGTCG TTTCGGTTAC GACTTCTTCC TGTCTGAAAC GAACGGCGTG
AAACAAGCCT TCCAATTCGC TGATGAAGCG ATTCGTATGG CGCTAGTGAA CCTAGAAGCA
GAAGCTGCAC CTGCAGGCAT GATGCCTGTG GTACTTGGCT CTGGCTGGCC GGGCGTATTG
CTGCACGAAG CGGTAGGTCA CGGTTTAGAG GGTGACTTCA ACCGTAAAGA GTCGTCAGTA
TTCTCTGGCA AGATGGGTGA GCAAGTGACG TCTCCGCTTT GTACTATCGT GGATGATGGC
ACGCTGAAAG ACCTACGCGG ATCATTGAAC GTCGATGATG AAGGTGTGAA CGGTCAATAC
AACACGCTTA TCGAAAATGG TGTGCTTAAG GGTTACATGC AAGACAAGCT AAACGCACGC
CTAATGGGTG TAAACCCAAC AGGTAATGGC CGCCGTGAAT CTTACGCGCA TTTGCCAATG
CCACGTATGA CCAATACTTA CATGCTACCG GGCGAGCACA CACCAGAAGA GCTTATCTCT
ACGGTGAAGA AAGGTCTATA CGCACCAAAC TTCGGTGGCG GTCAGGTGGA CATCACTTCT
GGTAAGTTCG TGTTCTCAGC ATCAGAAGCG TACTTGATTG AAGATGGTAA AATCACTCGC
CCAGTGAAAG GCGCAACGCT GATTGGCTCT GGTATTGAAG CGATGCAGCA AGTTTCTATG
GTGGGTAACG ACCTAAGCAT CGACAGAGGC GTTGGCGTGT GTGGTAAGGC GGGTCAAAGT
GTGCCGGTTG GCGTTGGTCA GCCTACATTG AAGCTCGATT CCATCACCGT GGGCGGTACT
GAGTAA
 
Protein sequence
MSINQIEQAL LAPNGLTEQD IADTLASIAT RQIDYADIYF QSSWHESLVL EDSIIKDGSF 
NIDCGVGVRA VTGEKTGFAY SDQIQLDGLK QSAIAARGIA QQGQNGKVHA FKRSDNQAYY
DAVNPLASWE KQQKTELLLS LDAYIRTKEP LIKEVSISIS GVHEQMLVAA TDGTYAGDIR
PLVRLSISVL AEKGDRRERG SAGGGGRFGY DFFLSETNGV KQAFQFADEA IRMALVNLEA
EAAPAGMMPV VLGSGWPGVL LHEAVGHGLE GDFNRKESSV FSGKMGEQVT SPLCTIVDDG
TLKDLRGSLN VDDEGVNGQY NTLIENGVLK GYMQDKLNAR LMGVNPTGNG RRESYAHLPM
PRMTNTYMLP GEHTPEELIS TVKKGLYAPN FGGGQVDITS GKFVFSASEA YLIEDGKITR
PVKGATLIGS GIEAMQQVSM VGNDLSIDRG VGVCGKAGQS VPVGVGQPTL KLDSITVGGT
E