| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03676 |
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| Symbol | |
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| ID | 5555339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3705083 |
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| End bp | 3707992 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640909155 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_001446817 |
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| Protein GI | 156975910 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTG CTTTGGGGCA GCGCTGGATT AGCGATACGG AAAGCGATTT AGGTTTAGGT
ACCGTAGTAG CAATGGATGC TCGTACTGTG ACATTGATGT TTGCAGCATC AGAGGAAAAC
CGAGTTTACG CACGTAACGA TGCACCAGTT ACCCGAGTAA CGTTCAACGT CGGTGATGTC
ATCGATTGCC AAGAAGGTTG GTCATTAAAA GTTGAAGAAG TACTGGAAGA TGAAGGTCTA
TACACCTATT TCGGTACTCG TGAAGACACG CAAGAAACGG CGATCGTGTT GCGTGAAATC
TTCCTAAGCA ACCACATTCG TTTTAACAAG CCGCAAGACA AGTTGTACGC AGGTCAAATC
GACCGCATGG ACAACTTTGT ACTTCGCTAT CGTGCGCTAC AAAACCAATT TGAGCAACAC
AAGAGCCCAA TGCGTGGTCT GTGTGGCATG CGTGCAGGCT TGATTCCTCA TCAGCTTTAT
ATCGCACATG AAGTGGGTCG TCGTCACGCG CCTCGCGTAT TGCTAGCGGA TGAAGTTGGT
CTGGGTAAAA CCATCGAAGC GGGCATGATC ATCCACCAGC AAGTGCTGTC AGGTCGTGCT
GAACGTATCC TTATCGTGGT GCCCGAGACA CTGCAACACC AGTGGCTTGT TGAGATGATG
CGTCGTTTCA ACCTGCACTT CTCTATCTTT GATGAAGAGC GTTGTATTGA AGCGTTCGCA
GAAGCTGAAA ACCCATTTGA TACGCAGCAA TATGTGCTGT GTTCACTGGA TTTCCTACGT
AAGAGCCGCA AGCGTTTCGA GCAAGCGCTA GAAGGCGAGT GGGATCTATT GGTTGTCGAT
GAAGCGCACC ACTTAGAATG GAGCCAAGAC AAACCAAGCC GCGAATACCA AGTGGTAGAA
GGCTTGGCAG AACGCACTGC GGGTGTGCTA CTGCTAACGG CAACACCAGA GCAGCTAGGT
CGTGAGAGCC ACTTCGCTCG TCTACGTCTG CTAGACCCAG ATCGCTTCTA CGATTACGAC
GCATTCGTTG AAGAAGAAGA GCAATACGCA CCTGTAGCGG ATGCTATCAC GTCGCTATTC
TCTGGTGAGA AACTGCCTGA CGAAGCGAAA AATCAAATTA CGGAACTGCT TTCTGAGCAA
GACGTTGAGC CGCTATTCCG CATTATCGAA AGCGACAGTG ATGAAGAAGC GAAAGCGTCA
GCGCGCCAAG AACTGATCGA CAACCTGATG GACCGTCACG GTACAGGTCG CGTTCTGTTC
CGTAACACGC GTGCAGCGAT CAAAGGTTTC CCGAAACGTA ACGTGCATCT AATGCCAATG
GACATTCCGC AGCAGTACAC CACGTCAATG CGTGTATCAG GCATGATCGG CGGCAAGATG
ACGCCAGAAG CACGAGCGGT GAAGAACCTT TATCCAGAAG AAATCTTCCA AGAATTTGAA
GGCGAAGATT CAAGCTGGTG GCAGTTCGAC TCACGTGTTA ACTGGCTACT TGAGAAAGTA
AAAGAGAAAC GCAGCGACAA AGTACTGGTT ATTGCCTCTC GTGCAAGTAC TGCGCTGCAA
CTTGAGCAGG CACTGCGTGA GCGTGAAGGT ATTCGTGCAA CTGTATTCCA CGAAGGCATG
TCGATTCTTG AGCGTGACAA AGCGGCTGCT TACTTTGCGC AAGAAGAGGG CGGCGCGCAG
GTTCTTATCT GTAGCGAAAT CGGCTCAGAA GGTCGTAACT TCCAGTTTGC TAACCAGCTT
GTGATGTTCG ATTTACCGTT CAACCCAGAC TTGCTAGAGC AGCGTATTGG TCGTCTGGAC
CGTATCGGTC AGAAGCGTGA TATCGATATC CACGTGCCTT ACCTAAAAGA CACGTCACAA
GCGATTCTTG CTCGTTGGTT TGATGAAGGT CTGAACGCGT TTGCTGAAAC CTGTCCAACA
GGTCGCGCGG TTTACGATAA GTACTCTGAT GCTCTGATCG AAATGCTGGC GTCTGGTGAT
GTTTCAAACC TTGATGAAGT GATTGAAGAA TCAGCGAAGA TGAACAAAGA GCTGAAATCA
CAACTTGAGC AAGGCCGTGA CCGTCTACTA GAGATGCATT CAAACGGCGG CGAGAAAGCG
CAGCAGATTG TTGAGAAAAT CTCATCGACA GATGGTGACA CAAACCTAGT GACGTTCGCA
TTGTCTCTGT TCGACACCAT TGGCTTGAAC CAAGACGACA AAGGCGAGAA CGCACTTGTG
GTAACGCCAT CTGAGCACAT GATGGTACCA AGCTACCCAG GTTTGCCATA CGAAGGCGCG
ACAATCACGT TTGACCGTGA TACTGCGCTG TCTCGTGAAG ATATGCACTT CATCAGTTGG
GAACACCCAA TGATTCAAGG CGGTATCGAT CTGCTGATGA GCGAAGGTGT GGGTACCTCT
GCGGTTTCTC TGCTGAAGAA CAAAGCACTA CCAGTGGGCA CTATCTTACT TGAGTTGGTT
TACGCGGTGG ATGCACAAGC ACCAAAACGC AGTGGCATTA CTCGTTTCCT ACCGAAGACG
CCAATTCGCA TGATGATGGA TGCTCGTGGT AACGATCTGT CTCCTCAGGT TGAGTTTGAA
GGCTTCAACC GTCAGCTTAG CCCGGTAAAC CGTCACCTAG GCAGCAAGCT AGTGACATCA
GTACAGAAAG ACATTCACAG CCTAATCGAA GCGGGTGACG CATTGGTTGA GCAGAAAGTG
GAAGAAGTTC GCAAGCAAGC GCACCAAGAC ATGCAACAAA GCTTGAATGC CGAGCTTGAG
CGTCTACAAG CACTGAAAGC GGTTAACCCG AACATCCGTG ATGAAGAAAT TGAATCGATT
GAAGAGCAAA TCAAAGAGCT AACAGGTTAC ATCAACCAAG CTCAGGTTCA GTTAGATTCG
CTACGTTTGA TTGTGGTCAG CCATAACTAA
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| Protein sequence | MTFALGQRWI SDTESDLGLG TVVAMDARTV TLMFAASEEN RVYARNDAPV TRVTFNVGDV
IDCQEGWSLK VEEVLEDEGL YTYFGTREDT QETAIVLREI FLSNHIRFNK PQDKLYAGQI
DRMDNFVLRY RALQNQFEQH KSPMRGLCGM RAGLIPHQLY IAHEVGRRHA PRVLLADEVG
LGKTIEAGMI IHQQVLSGRA ERILIVVPET LQHQWLVEMM RRFNLHFSIF DEERCIEAFA
EAENPFDTQQ YVLCSLDFLR KSRKRFEQAL EGEWDLLVVD EAHHLEWSQD KPSREYQVVE
GLAERTAGVL LLTATPEQLG RESHFARLRL LDPDRFYDYD AFVEEEEQYA PVADAITSLF
SGEKLPDEAK NQITELLSEQ DVEPLFRIIE SDSDEEAKAS ARQELIDNLM DRHGTGRVLF
RNTRAAIKGF PKRNVHLMPM DIPQQYTTSM RVSGMIGGKM TPEARAVKNL YPEEIFQEFE
GEDSSWWQFD SRVNWLLEKV KEKRSDKVLV IASRASTALQ LEQALREREG IRATVFHEGM
SILERDKAAA YFAQEEGGAQ VLICSEIGSE GRNFQFANQL VMFDLPFNPD LLEQRIGRLD
RIGQKRDIDI HVPYLKDTSQ AILARWFDEG LNAFAETCPT GRAVYDKYSD ALIEMLASGD
VSNLDEVIEE SAKMNKELKS QLEQGRDRLL EMHSNGGEKA QQIVEKISST DGDTNLVTFA
LSLFDTIGLN QDDKGENALV VTPSEHMMVP SYPGLPYEGA TITFDRDTAL SREDMHFISW
EHPMIQGGID LLMSEGVGTS AVSLLKNKAL PVGTILLELV YAVDAQAPKR SGITRFLPKT
PIRMMMDARG NDLSPQVEFE GFNRQLSPVN RHLGSKLVTS VQKDIHSLIE AGDALVEQKV
EEVRKQAHQD MQQSLNAELE RLQALKAVNP NIRDEEIESI EEQIKELTGY INQAQVQLDS
LRLIVVSHN
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