| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03647 |
|---|
| Symbol | pyrB |
|---|
| ID | 5555335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 3679174 |
|---|
| End bp | 3680139 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909126 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001446788 |
|---|
| Protein GI | 156975881 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGATAG TCACCACTGT TATAGGGAAG AAGATCATGG CGAACTCGCT TTACCAGAAG
CACATCATCT CTATTCCAGA GCTTTCACGT GAAGAACTGG AACTGATTGT AGAAACTGCA
GGTCAGCTAA AAAAAGAACC TCGTCCAGAA CTGATTAAAA ACAAGGTTGT AGCGAGCTGT
TTCTTTGAGC CATCCACGCG TACTCGTCTG TCGTTCGAGA CAGCAATTCA ACGTATCGGT
GGTGATGTTA TTGGTTTTGA TAACGGTGGT AACACCTCTC TGGCGAAAAA AGGCGAGACG
CTATCTGACT CAGTTCAAGT TATCTCTTCT TACGTCGATG CATTCGTGAT GCGCCACCCT
CAAGAAGGCG CAGCACGCTT GGCGTCTGAG TTTTCTAACG GCGTACCCGT TATCAACGCA
GGTGATGGCG CAAACCAACA CCCAACGCAA ACGCTACTCG ACCTGTACAC CATCGCAGAA
ACACAAAGTC GTTTAGATAA CCTGAACGTT GCGTTTGTTG GTGACCTAAA ATACGGTCGT
ACCGTGCACT CATTGACGCA AGCATTGGCG AAGTTCAACA ACATCCGCTT CTTCTTTGTT
GCACCAGAAG CACTTGCGAT GCCTGACTAC CTATGTGAAG AACTTGATGA AGCAGGTATC
CAATACAGCC TGCACACAGA CATGGAAAGC GTGATTCCTG AGCTAGACAT TCTGTACATG
ACTCGCGTAC AGAAAGAGCG CTTCGATGAA TCAGAATACG CACACATCAA GTCAGCTTAC
ATCCTAACAG CGGCACTACT AGAAGGTGCG CGTGAGAACT TGAAAGTACT TCACCCACTG
CCACGTGTGG ATGAAATCAC CACAGACGTC GACGTAACAC CACACGCTTA CTACTTCCAA
CAAGCAGAAA ACGGCGTTTA CGCGCGCCAA GCGTTGTTGG CACTGGTTCT TAACGAAACA
CTGTAA
|
|---|
| Protein sequence | MGIVTTVIGK KIMANSLYQK HIISIPELSR EELELIVETA GQLKKEPRPE LIKNKVVASC
FFEPSTRTRL SFETAIQRIG GDVIGFDNGG NTSLAKKGET LSDSVQVISS YVDAFVMRHP
QEGAARLASE FSNGVPVINA GDGANQHPTQ TLLDLYTIAE TQSRLDNLNV AFVGDLKYGR
TVHSLTQALA KFNNIRFFFV APEALAMPDY LCEELDEAGI QYSLHTDMES VIPELDILYM
TRVQKERFDE SEYAHIKSAY ILTAALLEGA RENLKVLHPL PRVDEITTDV DVTPHAYYFQ
QAENGVYARQ ALLALVLNET L
|
|---|
| |