| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03637 |
|---|
| Symbol | valS |
|---|
| ID | 5556148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 3670048 |
|---|
| End bp | 3672906 |
|---|
| Gene Length | 2859 bp |
|---|
| Protein Length | 952 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909116 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_001446778 |
|---|
| Protein GI | 156975871 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CATACAACCC AACTTCAATC GAACAAGCTC TGTATCAGAC TTGGGAAGAG
AAAGGCTACT TTAAGCCACA CGGTGACACT ACTAAAGAAT CATACAGCAT CATGATCCCG
CCACCGAACG TCACTGGTAG CCTACACATG GGCCACGCGT TCCAAGATAC GATCATGGAT
ACGCTTATCC GTTGTGAGCG CATGAAGGGT AAAAACACTC TTTGGCAAGT AGGTACGGAC
CACGCAGGTA TCGCAACTCA GATGGTTGTT GAGCGTAAGA TCGCTGCAGA AGAAGGCAAA
ACAAAACACG ATTACGGTCG TGAAGCCTTC ATCGACAAAA TCTGGGAATG GAAAGGCGAA
TCTGGCGGCA CTATCACTAA GCAGCTTCGT CGTCTTGGCG CATCTGTAGA CTGGGATCGC
GAGCGCTTTA CGATGGACGA TGGTCTATCT AACGCTGTTC AAGAAGTATT CGTACGTCTA
TACGAAGACG ATCTAATCTA CCGCGGTAAG CGTCTAGTTA ACTGGGATCC AAAACTACAC
ACAGCGATTT CAGATCTAGA AGTAGAGAAC AAAGACACCA AAGGCAACAT GTGGCACTTC
CGCTACCCAC TAGCGGATGG CGTTAAAACA GCGGATGGCA AAGACTACAT CGTTGTTGCA
ACCACTCGTC CAGAGACCAT GCTAGGCGAT ACTGGTGTTG CGGTTAACCC AGAAGATCCA
CGTTACAAAG ATCTTATCGG TAAAGAAATC ATCCTTCCTA TCGTTGATCG TCGCATCCCA
ATCGTGGGCG ATGAGCACGC AGATATGGAA AAAGGTACTG GCTGTGTGAA AATCACACCT
GCGCACGACT TCAACGACTA CGAAGTTGGT AAGCGCCACC AGCTACCAAT GATCAACATT
CTGACTTTCA ACGCGAACAT CCGTGACGCT TCTGAAGTAT TCAACACCAA CGGCGAAGCA
AGCGAAGCTT ACAGCACTGA GCTACCAGCT AAGTATCACG GTATGGAGCG TTTTGCCGCT
CGTAAAGCTA TCGTTGCTGA ATTCGACGAG CTAGGTCTAC TTGAAGAAGT GAAAGATCAC
GATCTACAAG TTCCTTACGG CGACCGTGGT GGCGTGGTTA TCGAACCAAT GCTAACTGAC
CAATGGTACG TACGTACTGC ACCTCTAGCG AAAACAGCAG TTGAAGCAGT AGAAAACGGC
GACATCCAAT TCGTTCCCAA GCAATACGAA AATATGTACT TCTCTTGGAT GCGTGACGTT
CAAGACTGGT GTATCTCTCG TCAGCTATGG TGGGGTCACC GCATCCCAGC TTGGTACGAT
AACCAAGGCA ATGTTTACGT AGGTCGTGAC GAAGAAGAAG TACGTAAGAA CAACAACCTA
GAGTCAGTAA TTGAACTTCA CCAAGACGAA GACGTACTGG ATACATGGTT CTCTTCTGCA
CTATGGACGT TCGGTACTCA AGGTTGGCCA GAGCAAACTG ACGACCTGAA AGTATTCCAC
CCTTCAGACG TACTAGTAAC GGGTTTCGAC ATCATCTTCT TCTGGGTTGC GCGCATGATC
ATGATGACCA TGCACTTCGT GAAAGACGAA AACGGCAAAC CACAAGTACC ATTTAAGACG
GTTTACGTTA CTGGCCTAAT CCGTGACGAA AACGGCGACA AGATGTCTAA GTCGAAAGGT
AACGTACTTG ACCCAATCGA CATGATCGAT GGTATCGACC TAGAGTCTCT AGTAGAGAAG
CGTTGTGGCA ACATGATGCA GCCTCAGCTA GCGAAGAAGA TCGAGAAGAA CACTCGTAAG
ACGTTTGAAA ACGGTATTGA AGCATACGGT ACAGACGCAC TACGTTTCAC TCTTGCAGCA
ATGGCATCAA CAGGTCGTGA TATCAACTGG GATATGAAGC GTCTTGAGGG TTACCGTAAC
TTCTGTAACA AACTATGGAA CGCAAGCCGT TACGTAATGA TGAACACAGA AGAGCAAGAT
TGTGGCTTCA ACGGTGGTGA GATTGAATAC TCACTAGCGG ACAAGTGGAT CGAGTCTCAG
TTTGAACTAG CGGCGAAAGC GTTCAACAAC CATATCGACA ACTTCCGTCT AGATATGGCG
TCTAACACGC TTTACGAATT CATCTGGAAC CAATTCTGTG ACTGGTACCT AGAGCTAACA
AAACCAGTTC TATGGAAAGG TACTGAAGCG CAACAGCATG GTACTCGCCG TACACTAATC
ACGGTTCTTG AGAAGACTCT ACGTCTGGCT CACCCAGTGA TTCCTTACAT CACTGAAACT
ATCTGGCAAA GCATCAAGCC ACTAGTTGAA GGTGTAGAAG GTGAGACAAT CATGCTTCAA
GCACTGCCTC AATTCGACGA AGCAAACTTC AACCAAGAAG CGCTAGACGA TATTGAATGG
GTGAAAGCGT TCATTACCAG CATCCGTAAC CTACGTGCTG AATACGACAT CAACCCAGGT
AAGCCGCTTG ACGTTATGCT GAAAGCAGCA AACGCAGAAG ACGCAGCGCG TCTAGAAGCA
AACAAACAAG TACTGATGTC TCTAGCGAAA CTAGAATCTG TACGCGTACT TGCTGCTGAC
GAAGAAACGC CAGCGTGTGC AACAGCATTG GTTGCTAAGT CTGAGCTGAT GATCCCAATG
GCGGGTCTGA TCGACAAAGA CGCAGAGCTT GCTCGTCTAG ATGGCGAAAT CAAGAAGACT
CACGGTGAAA TCAAGCGTAT CGAAGGCAAA CTAGGTAACG AAGGCTTCGT AGCGAAAGCT
CCTGAAGCAG TTGTTGCTAA AGAGCGTGAG AAACTTGAAG GCTACAAAGA GACGCTAGCT
AAGCTAGAAG AGCAGAAGAC AACGATCGCT GCACTTTAA
|
|---|
| Protein sequence | MEKTYNPTSI EQALYQTWEE KGYFKPHGDT TKESYSIMIP PPNVTGSLHM GHAFQDTIMD
TLIRCERMKG KNTLWQVGTD HAGIATQMVV ERKIAAEEGK TKHDYGREAF IDKIWEWKGE
SGGTITKQLR RLGASVDWDR ERFTMDDGLS NAVQEVFVRL YEDDLIYRGK RLVNWDPKLH
TAISDLEVEN KDTKGNMWHF RYPLADGVKT ADGKDYIVVA TTRPETMLGD TGVAVNPEDP
RYKDLIGKEI ILPIVDRRIP IVGDEHADME KGTGCVKITP AHDFNDYEVG KRHQLPMINI
LTFNANIRDA SEVFNTNGEA SEAYSTELPA KYHGMERFAA RKAIVAEFDE LGLLEEVKDH
DLQVPYGDRG GVVIEPMLTD QWYVRTAPLA KTAVEAVENG DIQFVPKQYE NMYFSWMRDV
QDWCISRQLW WGHRIPAWYD NQGNVYVGRD EEEVRKNNNL ESVIELHQDE DVLDTWFSSA
LWTFGTQGWP EQTDDLKVFH PSDVLVTGFD IIFFWVARMI MMTMHFVKDE NGKPQVPFKT
VYVTGLIRDE NGDKMSKSKG NVLDPIDMID GIDLESLVEK RCGNMMQPQL AKKIEKNTRK
TFENGIEAYG TDALRFTLAA MASTGRDINW DMKRLEGYRN FCNKLWNASR YVMMNTEEQD
CGFNGGEIEY SLADKWIESQ FELAAKAFNN HIDNFRLDMA SNTLYEFIWN QFCDWYLELT
KPVLWKGTEA QQHGTRRTLI TVLEKTLRLA HPVIPYITET IWQSIKPLVE GVEGETIMLQ
ALPQFDEANF NQEALDDIEW VKAFITSIRN LRAEYDINPG KPLDVMLKAA NAEDAARLEA
NKQVLMSLAK LESVRVLAAD EETPACATAL VAKSELMIPM AGLIDKDAEL ARLDGEIKKT
HGEIKRIEGK LGNEGFVAKA PEAVVAKERE KLEGYKETLA KLEEQKTTIA AL
|
|---|
| |