| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03584 |
|---|
| Symbol | |
|---|
| ID | 5556251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 3630491 |
|---|
| End bp | 3631663 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640909064 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001446746 |
|---|
| Protein GI | 156975839 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACGC CCCCAGCACT GAGCTTGTAT GTACACATCC CGTGGTGTGT ACAAAAGTGC
CCGTATTGCG ACTTTAACTC TCACGCGCTC AAAGCCGAAA TCCCAGAAGA AGAGTACATC
AATGCCCTTC TTGAAGACTT GGATACTGAC ATTGAGAAAT ACCGTCTTAA CGAAGCGCCA
CGTCCACTGC ATTCAATCTT CATTGGTGGT GGTACGCCAA GTTTGATTTC GGCAGAAGGC
ATCGAGCGTC TGCTTAAAGG TATTGAAGCG CGTATTCCGT TCAAGCCTGA AATCGAAATC
ACCATGGAAG CTAACCCAGG CACCATTGAA GCAGAGCGTT TTGTTGGCTA CCGCAAGGCT
GGTGTAACGC GAATCTCTAT CGGCGTGCAA AGCTTTGAAC AACAGAAGCT GGAGCGTTTG
GGGCGTATTC ACGGTCAAGA CGAAGCCGTC AATGCTGCTA AGCTGGCGCA CCAAATCGGT
TTGAACAGCT TTAACCTCGA TCTCATGCAC GGTTTACCAG ATCAAAGCAT CGAACAAGCC
TTAGCAGATT TGGACAAAGC GATTGAGTTG GCGCCGCCGC ACTTGTCTTG GTATCAGCTG
ACCATCGAAC CAAACACCAT GTTCTACTAC AAGCCACCGA CTCTGCCTGA TGACGATGAC
TTGTGGGATA TCTTCGAGCA AGGACATGAG AAACTCGCAG CGGCAGGTTA CGTTCAATAC
GAGATTTCTG GTTACAGCAA GCCGGGCTAT CAGTGCCAGC ACAACCTGAA CTATTGGCGC
TTTGGTGACT ACCTTGGCAT TGGTTGCGGC TCACACGGTA AGCTGAGCTT TGCTGATGGT
CGCATCGTTC GTACCACTAA GGTCAAGCAT CCACGCGGCT ATCTGATGGC ATACCAAAAC
ATGGTAAAGC CGTACTTGGA TAGTGAACAG CTTGTGGCTG ATGAAGATCG TCCGTTTGAG
TTCTTTATGA ACCGTTTCCG CTTAATGGAG GCGTGCCCGA AACAAGACTA CATCGATACG
ACAGGTCTGC CGTTGAGCTC AATTCAAGAG ACTATCGATT GGGCGCTTGA AATGGGTTAC
CTGAGTGAAA CAGAGACTCA CTGGCAAATT ACCGAGAAAG GTAAGCTGTT CCTCAATGAC
TTGCTTGAAG CCTTTATGGC GGAAGAGGAA TAA
|
|---|
| Protein sequence | MLTPPALSLY VHIPWCVQKC PYCDFNSHAL KAEIPEEEYI NALLEDLDTD IEKYRLNEAP
RPLHSIFIGG GTPSLISAEG IERLLKGIEA RIPFKPEIEI TMEANPGTIE AERFVGYRKA
GVTRISIGVQ SFEQQKLERL GRIHGQDEAV NAAKLAHQIG LNSFNLDLMH GLPDQSIEQA
LADLDKAIEL APPHLSWYQL TIEPNTMFYY KPPTLPDDDD LWDIFEQGHE KLAAAGYVQY
EISGYSKPGY QCQHNLNYWR FGDYLGIGCG SHGKLSFADG RIVRTTKVKH PRGYLMAYQN
MVKPYLDSEQ LVADEDRPFE FFMNRFRLME ACPKQDYIDT TGLPLSSIQE TIDWALEMGY
LSETETHWQI TEKGKLFLND LLEAFMAEEE
|
|---|
| |