Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03572 |
Symbol | |
ID | 5553997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3621582 |
End bp | 3622313 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640909052 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001446734 |
Protein GI | 156975827 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTATCC CTCGAATTTA TCATCCAGAA ACCATTCAAC AACTCGGCGT AATTGCTCTG AGCGACGATG CAGCTGGCCA CATTGGTCGC GTGCTGCGTA TGAAAGAAGG GCAAGAAGTC CTACTGTTTG ACGGCAGCGG CGCAGAATTC CCAGCAGTCA TCAGCGAAGT CAGCAAAAAG AATGTGATGG TTGAGATCTC TGAACGCGTA GAAAGCAGCA TTGAATCACC ACTTGACCTT CATCTTGGTC AGGTCATTTC GCGTGGCGAC AAGATGGAAT TCACCATCCA AAAATCGGTG GAACTTGGCG TTAATACGAT TACACCGCTT ATCTCTGAAC GTTGTGGTGT GAAACTAGAC CAAAAACGTT TTGAGAAGAA ACTGGCTCAG TGGCAAAAGA TTGCGATCAG TGCGTGTGAA CAGTGTGGTC GCAACGTAGT ACCTGAAATT CGCCCTATCA TGAGCCTAGA AGAATGGTGC CAAGAAGAGT ACGACGGCTT GAAACTAAAC CTTCATCCAC GCGCTAAATA CTCGATCAAC ACCCTGCCAA CACCTGTTGA AAAAGTTCGC CTATTGATTG GCCCTGAAGG CGGTCTATCC TCTGACGAAA TCGACATGAC TCGCGAATAC CAATTTGAAG AGACGCTACT CGGCCCTCGC GTTTTGCGCA CCGAAACAGC GGCTCTGACA GCAATTACAG CTTTACAAGT TCGTTTCGGC GATCTTGGTT AA
|
Protein sequence | MRIPRIYHPE TIQQLGVIAL SDDAAGHIGR VLRMKEGQEV LLFDGSGAEF PAVISEVSKK NVMVEISERV ESSIESPLDL HLGQVISRGD KMEFTIQKSV ELGVNTITPL ISERCGVKLD QKRFEKKLAQ WQKIAISACE QCGRNVVPEI RPIMSLEEWC QEEYDGLKLN LHPRAKYSIN TLPTPVEKVR LLIGPEGGLS SDEIDMTREY QFEETLLGPR VLRTETAALT AITALQVRFG DLG
|
| |