Gene VIBHAR_03572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03572 
Symbol 
ID5553997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3621582 
End bp3622313 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content48% 
IMG OID640909052 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001446734 
Protein GI156975827 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCC CTCGAATTTA TCATCCAGAA ACCATTCAAC AACTCGGCGT AATTGCTCTG 
AGCGACGATG CAGCTGGCCA CATTGGTCGC GTGCTGCGTA TGAAAGAAGG GCAAGAAGTC
CTACTGTTTG ACGGCAGCGG CGCAGAATTC CCAGCAGTCA TCAGCGAAGT CAGCAAAAAG
AATGTGATGG TTGAGATCTC TGAACGCGTA GAAAGCAGCA TTGAATCACC ACTTGACCTT
CATCTTGGTC AGGTCATTTC GCGTGGCGAC AAGATGGAAT TCACCATCCA AAAATCGGTG
GAACTTGGCG TTAATACGAT TACACCGCTT ATCTCTGAAC GTTGTGGTGT GAAACTAGAC
CAAAAACGTT TTGAGAAGAA ACTGGCTCAG TGGCAAAAGA TTGCGATCAG TGCGTGTGAA
CAGTGTGGTC GCAACGTAGT ACCTGAAATT CGCCCTATCA TGAGCCTAGA AGAATGGTGC
CAAGAAGAGT ACGACGGCTT GAAACTAAAC CTTCATCCAC GCGCTAAATA CTCGATCAAC
ACCCTGCCAA CACCTGTTGA AAAAGTTCGC CTATTGATTG GCCCTGAAGG CGGTCTATCC
TCTGACGAAA TCGACATGAC TCGCGAATAC CAATTTGAAG AGACGCTACT CGGCCCTCGC
GTTTTGCGCA CCGAAACAGC GGCTCTGACA GCAATTACAG CTTTACAAGT TCGTTTCGGC
GATCTTGGTT AA
 
Protein sequence
MRIPRIYHPE TIQQLGVIAL SDDAAGHIGR VLRMKEGQEV LLFDGSGAEF PAVISEVSKK 
NVMVEISERV ESSIESPLDL HLGQVISRGD KMEFTIQKSV ELGVNTITPL ISERCGVKLD
QKRFEKKLAQ WQKIAISACE QCGRNVVPEI RPIMSLEEWC QEEYDGLKLN LHPRAKYSIN
TLPTPVEKVR LLIGPEGGLS SDEIDMTREY QFEETLLGPR VLRTETAALT AITALQVRFG
DLG