Gene VIBHAR_03555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03555 
Symbol 
ID5556319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3604598 
End bp3605254 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID640909035 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001446717 
Protein GI156975810 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA GAAAGCGGCT GGTTGGGCAG CACTTAAGTA TGTTGAGAAA 
GGCAGCATTG TCGGTGTTGG TACTGGCTCT ACCGTGAATC ACTTCATCGA TGCCCTAGGC 
AGTATCAAAG ATGATATCAA GGGTGCAGTG TCTAGCTCTG TTGCTTCAAC TGAGCGTCTA 
AAAGAGCTTG GTATTGAGGT TTATGAGTGT AACGACGTAG CAATGCTAGA TATCTACGTT 
GATGGTGCAG ATGAAATCAA CGCAGCACGT GAAATGATCA AAGGCGGCGG TGCTGCACTG 
ACTCGTGAAA AGATCGTTGC GGCTATTTCA GAAAAATTCG TATGTATCGT TGACGGCACA 
AAAGCAGTTG ACGTACTTGG CCAGTTCCCA CTTCCTGTAG AAGTTATCCC AATGGCGCGT 
TCTTACGTGG CTCGTGAATT GGTAAAACTG GGCGGTGACC CTGCATACCG TGAAGGCGTA 
ACAACGGACA ACGGTAACGT AATCCTAGAC GTACACAACA TGCAAATCAC TAACCCGAAA 
GAGCTTGAAG ACAAGATCAA CGGCATTGCA GGTGTGGTAA CTGTGGGTCT ATTCGCTCAC 
CGTGGTGCTG ACGTGGTTAT CACTGGCACA CCAGAAGGTG CGAAAATAGA AGAATAA
 
Protein sequence
MTQDEMKKAA GWAALKYVEK GSIVGVGTGS TVNHFIDALG SIKDDIKGAV SSSVASTERL 
KELGIEVYEC NDVAMLDIYV DGADEINAAR EMIKGGGAAL TREKIVAAIS EKFVCIVDGT 
KAVDVLGQFP LPVEVIPMAR SYVARELVKL GGDPAYREGV TTDNGNVILD VHNMQITNPK 
ELEDKINGIA GVVTVGLFAH RGADVVITGT PEGAKIEE