Gene VIBHAR_03539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03539 
Symbol 
ID5553666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3592035 
End bp3592505 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content49% 
IMG OID640909019 
Productpositive regulator of sigma E activity 
Protein accessionYP_001446702 
Protein GI156975795 
COG category[T] Signal transduction mechanisms 
COG ID[COG3086] Positive regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTG CATTGGCTAC CGTGACGGGT GTTCACCGTC ACGGTCAGCA ATACGATGTC 
GATCTCAGCT GTGAGCAACA AACCAGTTGC AGCAGCTGTT CATCGCAAAA AAGTTGCGGC 
ACAGGCGTGG TTACTAAAGC GATTGGTAAC AAAACGCTGT CGTGGCATTT GCGTACTCCA 
AAATCCGTCA AAGTTGGTCA AGTCGTGGAA ATCGGTTTTC CTGAATCAAG CCTGATCAAA 
TCTGCTATGG CGGTCTACCT TCTTCCTCTG TTTGGTTTGA TTCTCGGTGC CGTGATTGGC 
AACTTCCTGC TTGCACCTAT AACGACAGGT GGTGAGGGTA TTACTATCCT ATCCTCGGTG 
TTGTTTGCGG CTGGTGGTAT GTGGCTCGCA AAACGTGTGT CACGCCCGCT TGAAGATGAG 
TCAAAGCGCC AAGTCACCCT TATTCGAGTT CTCGGTGAAC CTATTCAATA A
 
Protein sequence
MMTALATVTG VHRHGQQYDV DLSCEQQTSC SSCSSQKSCG TGVVTKAIGN KTLSWHLRTP 
KSVKVGQVVE IGFPESSLIK SAMAVYLLPL FGLILGAVIG NFLLAPITTG GEGITILSSV 
LFAAGGMWLA KRVSRPLEDE SKRQVTLIRV LGEPIQ