| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03487 |
|---|
| Symbol | |
|---|
| ID | 5554146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3541059 |
|---|
| End bp | 3543902 |
|---|
| Gene Length | 2844 bp |
|---|
| Protein Length | 947 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640908967 |
|---|
| Product | peptidase |
|---|
| Protein accession | YP_001446659 |
|---|
| Protein GI | 156975752 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATGT TTTGGGTAAG CGCGTGCTCA CTATTAGTGA TCACGGGCTG TGCATCAAAC
TCCCCTGTAT CATCACTGCC TGATGGAGTT ACTTTCGTCG AGTCATCGAA AGCGGAAGAA
GGCAAAGTGA AAATCCCATA CCAGAAATAT CAACTCGATA ACGGCCTTAC GGTGATTCTG
GCACCAGAAG ACTCAGATCC ATTGGTTCAC GTTGATGTGA CTTACCACGT AGGTTCAGCG
CGTGAAGAAA TTGGTAAGTC AGGTTTTGCT CATTTCTTTG AGCACATGAT GTTCCAAGGC
TCTGAGAATG TGGGGGATCA AGAGCACTTC AAAATTATTA CGGAAGCGGG TGGTACACTA
AACGGCACCA CTAACCGTGA CCGCACTAAC TACTTCGAAA CCGTACCAGC TAACCAGCTA
GAGAAAATGC TGTGGTTAGA GTCGGATCGT ATGGGCTTCC TGTTGGATGC GGTATCGCAG
CGTAAGTTTG AGATCCAACG TTCTACTGTG AAGAACGAAC GTGCCCAACG TTACGATAAC
CGTCCGTATG GTTTGATGTG GGAACGTATG GCTGAAGCGC TGTACCCTGA AGGTCACCCA
TATTCATGGC AGACGATCGG TTATGTTGAA GATCTTGATC GCGTTGATGT GAACGATCTG
AAAGCTTTCT TCCTACGTTG GTATGGTCCA AACAACGCGG TATTGACCAT TGGTGGCGAT
ATCGATGTTG AACAGACGCT GGCGTGGGTG AATAAATACT TCGGCTCTAT CCCTCGTGGT
CCTGAAGTGG AAAATGCACC TAAGCAGCCT GCGAAACTAG CAGAAAGCAA ATTCATCACC
TTAGAAGACC GTATTCAGCA ACCTATGGTC ATGGTGGCAT GGCCGACAAC CTACAACGGT
GAAGCAAATC AAGCGTCGCT AGATACGCTA TCAAGTGTAC TAGGTAGTGG CACTAACAGT
GTGCTTTATC AAGACTTAGT TAAAACCCAG AAAGCAGTCG ATGCAGGATC GTTCCATGAT
TGTGCTGAGC TATCGTGTAA CTTCTATGTC TACGCGATGG GAGACTCTGG CGACAAAGGC
GATCTTACTA AGTTGTATGA TGAGTTGATG GCATCGCTGG ATAAGTTTGC CAAAGACGGC
GTAACCAAAG ATCGCCTTGA ACAATTGAAA GGCAAAACGG AAGCTGATGC GATTTTTGCT
CTGGAAAGTG TGAAAGGTAA GGTAACGCAA CTGGCGTCGA ATCAAACATT CTTTGGTAAA
CCGGATCTGA TTGAAGAGCA ACTTGAACAG CTTCGTGCGG TGACGCCTGA ATCCGTAGAG
AAAGCATACA GTGATTTTAT TCAAGGTAAT AACAAGGTAA CGCTGAGCGT TGTGCCACGT
GGTAAGATCG AACTTGCGGT AAAACCTGCG ACGTTTGTGA CACCAAAGCG TACTTTGCCA
GAGTACGAAA AGATTACCGA TGACCAATTG GCGTACCGTC GAGCGACGGA TAACTTCGAT
CGCTCTGTGC AGCCGCCTGT TGGTGCCCCA GTAGAAGCAA TCATGCCGAA GTTGTACGAC
ATCCACTTCA AGAATGGCTC TGAGTTACTG GGGACCATGA GCAGCGAGAC ACCAACCGTG
ACCATGCAGT TTAGCTTGCC AGCAGGGACA CGATTCGTTG AGAAAGGTAA AGAGGGTCTT
GCTCAGTTGA CCGCGGCGAT GCTGCAAGAA GGCACGACAA AACATTCAGC TGAAGAAATT
CAAGCAGAGC TGGACAAGTT AGGCAGTGTG ATTGCTGTTG ATGCGACGGG ATACACCACA
GATATCAGCG TTTCTTCTCT GGAGAAAAAA CTAGCGCCAA CGCTAAAGAT CGTCGAAGAA
ATGTTGCTAT CGCCAGCATT TAAGCAAGAA GACTTCGACC GCGTAAAAGC TCAAGCTCTA
GAAGGTTTGG TGTATGAACA TCAAAAACCA AGCTGGATGG CATCGCAGGC AAGTCGCCAA
GTGCTGTATG GCGATTCTAT CTTTGCGCGC CCGAAAGATG GCACCAAAGC AGGATTGAAG
GCTCTGACGC TGGATGATGT ACGTGACTTC TATTCGAAGC ACTGCACGCC ACAAAGTGCC
CAGATCATTG CGGTTGGTGA CATCAATAAA GCGGATGTAG AGAAGCAGTT GTCTTTCTGG
GCGAACTGGG AAGACGAAGC AGCACCATTG TATGCGCCAC AAGCTATCGC GCCATTGGGT
TCGCAAAAAG TACATTTGGT TGATAAGCCA GGCGCACCAC AGAGTGTCGT CATGATGGTT
CGTCAAGGTA TGCCTTACGA TGCTACGGGT GATTTCTACT TGGGGCAGCT GGCAAACTTT
AACTTAGCGG GTAACTTTAA TAGCCGTATC AACCAAAACC TTCGCGAAGA CAAAGGCTAC
ACTTATGGTG CCTATGGTTA TTTCTCCGGC AACGTAGAAA CAGGTTCTGT TGTCTTTACA
GCGCAAGTGC GTGCAGATTC GACGGTTGCG TCTATCATCG AGATGGAGAA TGAGTTGAAC
GAGTTCTCAC AATCAGGCAT GACTGACGAT GAATTGAAAT TTATGCGCCA AGCGGTCGGT
CAAAAAGATG CACTGAAATA CGAGACGCCA ACACAGAAAG GCAAACTCAT CAGTGATATT
TTGAAATACA ACCTAGATAA AGATTACTTA CAGCAACGCA ACGCTATTGT TGAGACTGTC
GATAAGCAGA CGCTCAACGC TCTAGCTGAA AAATGGTTCG ACCCGAATGA CTATCAGATA
GTCGTTGTCG GGGATGCGAA ATCCCTTCGC CCTCAACTAG AAAAGTTAGG GAAAGACGTG
GAAGAGCTTG AAATCATTCG ATAG
|
|---|
| Protein sequence | MRMFWVSACS LLVITGCASN SPVSSLPDGV TFVESSKAEE GKVKIPYQKY QLDNGLTVIL
APEDSDPLVH VDVTYHVGSA REEIGKSGFA HFFEHMMFQG SENVGDQEHF KIITEAGGTL
NGTTNRDRTN YFETVPANQL EKMLWLESDR MGFLLDAVSQ RKFEIQRSTV KNERAQRYDN
RPYGLMWERM AEALYPEGHP YSWQTIGYVE DLDRVDVNDL KAFFLRWYGP NNAVLTIGGD
IDVEQTLAWV NKYFGSIPRG PEVENAPKQP AKLAESKFIT LEDRIQQPMV MVAWPTTYNG
EANQASLDTL SSVLGSGTNS VLYQDLVKTQ KAVDAGSFHD CAELSCNFYV YAMGDSGDKG
DLTKLYDELM ASLDKFAKDG VTKDRLEQLK GKTEADAIFA LESVKGKVTQ LASNQTFFGK
PDLIEEQLEQ LRAVTPESVE KAYSDFIQGN NKVTLSVVPR GKIELAVKPA TFVTPKRTLP
EYEKITDDQL AYRRATDNFD RSVQPPVGAP VEAIMPKLYD IHFKNGSELL GTMSSETPTV
TMQFSLPAGT RFVEKGKEGL AQLTAAMLQE GTTKHSAEEI QAELDKLGSV IAVDATGYTT
DISVSSLEKK LAPTLKIVEE MLLSPAFKQE DFDRVKAQAL EGLVYEHQKP SWMASQASRQ
VLYGDSIFAR PKDGTKAGLK ALTLDDVRDF YSKHCTPQSA QIIAVGDINK ADVEKQLSFW
ANWEDEAAPL YAPQAIAPLG SQKVHLVDKP GAPQSVVMMV RQGMPYDATG DFYLGQLANF
NLAGNFNSRI NQNLREDKGY TYGAYGYFSG NVETGSVVFT AQVRADSTVA SIIEMENELN
EFSQSGMTDD ELKFMRQAVG QKDALKYETP TQKGKLISDI LKYNLDKDYL QQRNAIVETV
DKQTLNALAE KWFDPNDYQI VVVGDAKSLR PQLEKLGKDV EELEIIR
|
|---|
| |