Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03478 |
Symbol | trmD |
ID | 5556171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3532379 |
End bp | 3533122 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908958 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001446650 |
Protein GI | 156975743 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGTTG GCGTTATTAG CCTTTTTCCT GAAATGTTCC GTTCTGTTAC TGATTTTGGG GTAACAGGTC AAGCGGTTAA AAAAGGTCTT TTGTCGATTG AGACTTGGAA TCCTCGCGAT TTCACTCATG ACAAACATCG CACTGTCGAT GACCGACCTT ACGGTGGTGG TCCTGGTATG TTAATGATGG TTCAGCCTTT GCGCGATGCC ATTCATACCG CGAAAGCAGC CTCACCGGGT AAGACGAAAG TCATTTACCT TTCTCCTCAA GGTCGCAAGC TCGACCAGAA AGGAGTCGAA GAACTGGCAA CGAATGAGAA TTTACTTCTG ATTTGTGGTC GTTACGAAGG GGTAGATGAG CGCATCATTC AATCTGAAGT CGACGAAGAA TGGTCGATTG GTGATTTTGT GATGACGGGT GGTGAGATAC CAGCCATGAC GTTGATCGAT TCTGTCTCTC GGTTTGTTCC GGGTGTACTA GGGGATTTCG CGTCAGCAGA AGAAGATTCT TTTGCAAATG GCTTGTTAGA TTGCCCTCAC TATACGCGTC CAGAAGTATT GGATGACAAA GAGGTACCAG CGGTACTGAT GTCAGGCAAT CACAAGGACA TTCGTCAATG GCGACTAAAA CAGTCGCTGG GCCGAACTTG GCTTAGAAGA CCAGAGCTCC TGGAAAACCT AGCTCTGACT GACGAACAGG AACAATTACT TGCTGAGTTC ATTAGTGAAC ATAACGCAAA GTAA
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Protein sequence | MWVGVISLFP EMFRSVTDFG VTGQAVKKGL LSIETWNPRD FTHDKHRTVD DRPYGGGPGM LMMVQPLRDA IHTAKAASPG KTKVIYLSPQ GRKLDQKGVE ELATNENLLL ICGRYEGVDE RIIQSEVDEE WSIGDFVMTG GEIPAMTLID SVSRFVPGVL GDFASAEEDS FANGLLDCPH YTRPEVLDDK EVPAVLMSGN HKDIRQWRLK QSLGRTWLRR PELLENLALT DEQEQLLAEF ISEHNAK
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