Gene VIBHAR_03454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03454 
Symbol 
ID5554163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3506680 
End bp3507450 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID640908934 
Producthypothetical protein 
Protein accessionYP_001446626 
Protein GI156975719 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGT TATATTGGAC CGCTTTTTGT AGCCTACTGA TGAAAGAGAT TAATCGCTTC 
ACACGAATTT GGGTGCAAAC CCTTGTGCCG CCAGCGATTA CGATGACGCT GTATTTCATC
ATCTTCGGTA GCCTAATTGG TTCTCGTATT GGTGAAATGA ACGGCTTTAG CTACATGGAA
TACATTGTGC CGGGCTTGAT CATGATGTCG GTGATAACCA ACTCGTATTC CAACGTCGCA
TCGTCATTCT TTAGTTCTAA ATTCCAGCGC AATATTGAGG AGTTGTTGGT TGCGCCAGTA
CCAAACTACG TCATCATTCT TGGTTTTGTT ATGGGAGGCG TCGTTCGTGG TTTGCTGGTG
GGCACCATCG TTACTTTCGT GTCGCTGTTC TTTGTTGATT TGCAAGTGGA CCACTGGGGC
ATCATTATCG CGACGGTATT TATGACTTCG GTTGTGTTCT CACTCGGTGG CTTGATTAAC
GCAGTTTACG CGAGAACGTT CGATGATATC TCCATCATCC CGACGTTTGT ATTGACGCCG
CTGACTTACC TTGGCGGTGT GTTTTACTCA ATCAGCCTAC TGCCTGAGTT TTGGCAAGGG
GTGTCTAAAC TGAACCCTAT CGTCTACATG GTGAATGCAT TCCGTTATGG CTTCCTTGGT
GTGTCCGACG TGGGGATTGT CACCTCGTTT AGCGTACTGA CGGTATTTGT TGTCGCGCTT
TATGCTGTGG CTCACTATCT GGTCACCAAA GGGATTGGTC TAAGAAGCTA A
 
Protein sequence
MYKLYWTAFC SLLMKEINRF TRIWVQTLVP PAITMTLYFI IFGSLIGSRI GEMNGFSYME 
YIVPGLIMMS VITNSYSNVA SSFFSSKFQR NIEELLVAPV PNYVIILGFV MGGVVRGLLV
GTIVTFVSLF FVDLQVDHWG IIIATVFMTS VVFSLGGLIN AVYARTFDDI SIIPTFVLTP
LTYLGGVFYS ISLLPEFWQG VSKLNPIVYM VNAFRYGFLG VSDVGIVTSF SVLTVFVVAL
YAVAHYLVTK GIGLRS