Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03448 |
Symbol | |
ID | 5553763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3500623 |
End bp | 3502011 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908928 |
Product | nucleotidyltransferase/poly(A) polymerase |
Protein accession | YP_001446620 |
Protein GI | 156975713 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACATGA ATACAAACGA CTATACAACA AGCGAATCTG CCATGATCCC AGAACTCGCT CTCAATGTAA TTACTCGTGA AGAGCACAAC ATTTCGCGTA AGCAGATCAG TGACAATGCA CTGAAGGTGC TATACCGACT AAACGGTGCC GGTTTCGATG CTTTTCTTGT AGGTGGCGGG GTTCGAGACT TACTGCTTGG ACAAAAACCA AAAGACTTTG ATATCGCAAC CAACGCGACA CCAGAACAGA TCAAACAGCT ATTTAGAAAC TGCCGTTTGA TTGGCCGTCG CTTCCGTCTC GCACACATTA TGTTTGGTCG AGACATCATC GAAGTTGCGA CCTTCCGTGG TCACCACCAA GAGCAAAAAA ACAAGAACGT TTCTCAGCAG TCAAAAGAAG GCATGCTGCT TCGTGACAAT GTTTACGGCA CTATTGATGA AGATGCAGAG CGCCGTGACT TCACGATTAA CTCGATGTAC TACAACATCG CAGACTACTC AATACACGAC TATGCACGTG GCATTGAGGA TCTAGAAGAC CGTCTTGTTC GCCTGATCGG TGATCCAGAA ACCCGTTACC GCGAAGACCC AGTGCGCATG CTGCGTGCGA TTCGCTTTGC TGTGAAGCTC GACTTCGACA TCGAAGAAGA CACCGCAGCA CCGATTGAAG AGATGGCACC GCTGCTACGC GATATCCCAT CGGCGCGTCT ATTCGAAGAA TCGTTGAAGA TGCTTCAATC TGGTCACGGC CTAGAAACTT ATCACCTACT GCGTGAATAC AACCTATTCC AGCAGCTTTT CCCTGCGATT GCTGAACACT TCACTGAAGA TTACGAATCT CACACTGAGC AAATGCTTGA TTTGGTGCTT GATTCAACCG ATATGCGTAT CGAAGAAGGC AAACGCATCA ATCCAGCATT CATGTTTGCT GCCATGCTGT GGTACCCGCT ATGCGCAATG GCTGACAAAC TGATGGAACA GCATAACCTG TGCCATTACG ACGCCATCAT GGAAGCGAGC AACATCATTC TTTATGACCA AGTACGTACC ATTGCGATTC CACGCCGTCA TACCGCGACA ATTCGTGAAA TTTGGCAGCT ACAATTACGT CTTCCACGAC GCAATGGCAA ACGCGCATTC CGCCTCATGG AGCTCAACAA ATTTAGAGCT GGCTTTGATT TTCTTGAAAT GCGCGGTGAA ATTGAGGGTG GAGACACTCA GAAGCTTGCC AAGTGGTGGG AAACTTTCCA AAATGCGGGC CGAGAAATGC GCCAAGCCAT GGCTGGCGAT CTCGATGGCC AAGCGCCTAA AACTGGCCAA CGCCGCCGTA AAACCTATCG CAAGAAAAAG AGTAAGCCGA AATCATGTTC ACAGCGTACA TTGCGGTAG
|
Protein sequence | MHMNTNDYTT SESAMIPELA LNVITREEHN ISRKQISDNA LKVLYRLNGA GFDAFLVGGG VRDLLLGQKP KDFDIATNAT PEQIKQLFRN CRLIGRRFRL AHIMFGRDII EVATFRGHHQ EQKNKNVSQQ SKEGMLLRDN VYGTIDEDAE RRDFTINSMY YNIADYSIHD YARGIEDLED RLVRLIGDPE TRYREDPVRM LRAIRFAVKL DFDIEEDTAA PIEEMAPLLR DIPSARLFEE SLKMLQSGHG LETYHLLREY NLFQQLFPAI AEHFTEDYES HTEQMLDLVL DSTDMRIEEG KRINPAFMFA AMLWYPLCAM ADKLMEQHNL CHYDAIMEAS NIILYDQVRT IAIPRRHTAT IREIWQLQLR LPRRNGKRAF RLMELNKFRA GFDFLEMRGE IEGGDTQKLA KWWETFQNAG REMRQAMAGD LDGQAPKTGQ RRRKTYRKKK SKPKSCSQRT LR
|
| |