| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03422 |
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| Symbol | |
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| ID | 5553479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 3461416 |
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| End bp | 3464802 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640908902 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446594 |
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| Protein GI | 156975687 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT TCTACAAAAA GCAGAAATTT AAGCGCCTGC AAAGCACGCT AATGACCGCG
TTTTTGGTTC TTAGTATTAC GCCACTGACG ATCACTGCTA TTTTCTTCCT CCAATCCCAC
ACTAAAGATT TGGAAGAACA GAGCACATCA CACTTGCTCT CAGTCCGTGA TACCAAACAA
CAGCAGATCA TCGACTACTT TGCAGCTCAA GAAACCGAAG TTATGGGCTT TGTTCGCTCA
GAATTGGCTT ATGCCAGTGG CGGACGCTTC TACGGTTTGG TCAATGCCTT TAGCCGATTA
GGCCACGACA TCGATGAAGC AAGAGAGAAT GCACAGCAAC GCTATATCAA AGGCAGCGGC
GATCAAATCA AAACGTCGAT TTTACCGGAA TCTTCCAACT ACGTTGGCAG TGAGCGTTAT
CGCCTTCTGC ATAAACGTTA TCACTGGGCT TACCTAGAGC TATTAAAGCG CTCTGATTTC
AACGATATTT TATTAGTTGA TATCGACGGT AACGTTACTT ATTCGATCAA TAAAGATGAT
AACTTCGGCA CCAACCTTCT CAGCGGCCGT TACAAAGACA CCGCTTTGGG AAAAACATTT
AAACGCCTTT CCGAGGATGT AAGCGCGCGC CGAAAAGTGA ATGAAGATTA CACGCCTGTC
GTGGTATCCG ACTTTGACAT TGAAAACGGT AAGCAAGTCG CTTGGTTGGG TGCGCCTATT
GTTCAGCAAG GCTATCTGCA CAGCTATGCA ATGTTCCGCT TGCCGAACAA TGGCATCACA
AAGCTGATTG CAGAAATCAA TCGTGACTCT TCAATTGATA CTTTATTAGT TGGCAGTGAC
CACAAACCTC GTACCATCAA CACCAAGCAA GAAGACATCC AAAACAGTTT AGAGATCGTC
GACAAAGCTT TAGCTGGCGA AACGGAAGTG GGCACTTACA GCAACCGTTT AGGCGAAGAG
ATGATTGCGG CATTTGCACC TATTGAGACT CGCGGTCTCA CTTGGGCTCT CGTTGTACAG
CTTCCTGAGA AAGAGGCCTT TGCACGTGTC CATCAGCTCG AGAAACTGTT TGTCATTGCG
ATGCTAATAG CGATCATCTT GGTTGTGATT GCTTCACATT ACTTATCTAA TTTCATCACC
TCTCCGCTGC TTAAGCTGAC TTGGGCAGCA GAGAAAGTAT CTGCCGGCGA TCTGGACGAA
ACCACTTTTA ATACCGAGCG TAAAGATGAA ATCGGTCGAC TCGCAATCAG CTTTGAGCGT
ATGCAGCGTT CAATTCGTGA AAAGATCCAA ACCATCAAGC AACAAAACGA AGAGCTAGAG
AGCAACATCA AACTGATCCA AAAGCAAAAC GAAGAATTGC AGTTGGCAGA TAAGCTGAAA
GATGAATTCC TAGCGACAAC CTCTCACGAG TTACGCACAC CATTGCACGG TATGGTTGGC
ATTGCAGAGA CACTGGTGTC TGGTGCAAAT GGCGCGATAC CTGCGAGCCA GAAGTACCAA
TTGGACATCA TCATCAAGAG TGGTCAGCGC CTAGCAAACC TCGTTGATGA TCTATTGGAT
TACCACAAGA TGCGCTACGG CAGCATGGAT ATCCAAAAGT CTGCAGTGAG CCTAGCCAGT
GCAACACGCT TGGTGCTGGA GCTTTCTGGT CACCTATTGG GTAACAAAAC CATCCGCATC
ATTAATCAAG TGCCAGCGGA TCTGAAAGCA GTCTCAGCAG ATCCTCAGCG TTTGGAACAA
GTGCTGTATA ACTTGATTGG CAACGCTATT AAGTACACTT CAGAAGGCAA AATCGTTATC
TCAGCGACCG TTGTAGACGA TCAAGTCCGA GTACAAGTGG TCGATACTGG TCAGGGTATT
CCAGCTGAAC ACCTAGAGCA TATCTTCGAA CCTCTTATCC AAGCAGGTCA AGATGCTAGT
CGCTACCGTC AAGGTGCAGG ACTAGGTCTA TCAATCAGCC GTCAACTTAT CGAGTTGATG
GGCGGTTCAT TGTATGTCAG CAGCCAACCT ATGGTCGGAA CGACATTCAG CTTCACCTTG
CCACTCGCTA GTGAAGAAGA AATCAAAGCG ACTGAAAGCC TTGCCGCTCG CGGGCATTTC
CAAATTCCAG AAGCGAACTT TGACAACAAT GACGACTTGT CTCTACCTGA AAACCCAGAT
GGTCCATTGC TGTACGTTGC TGATGATGAG CCCGTCAACC TGCGCGTTCT TGAAAGCTTC
TTAAGACTTG AAGGCTACCG AGTTCGTACC ATTTCAGACG GCCCTGAGAC ACTCGCTTTA
ATTGAACAAG AGAAGCCTGA GTTGCTGCTA CTGGATATTA TGATGCCAGG CATGAGTGGC
TATCAGGTTT GTAGTGAACT GCGTGAAACT TACGATCATG CAGAGCTGCC AATCATTATG
CTCACAGCGC TAAGCCAAAC CGAAGACCGC GTTAGGGGCT TTGAAGCGGG AGCGAACGAT
TACCTAACCA AACCATTTAA TAAGCAAGAG CTCGCGGCAC GTATTCAGGC CCACTTGACG
GCAAGTCAGG CTGAAATGCG CCACATCGAG AACAAGTTAC TGGAATCGGA GCTACGCCAG
CGTGCTGAAG TCGAAGCCAG TCTGCTCGAG ACACAAGGTA GACTGCTAGA ACAGCTAGAA
TCAGCACCTG AGGCGATTAT TTGTCTTCGT GAAGATCAAC GTATTCGCTT TGCTAACGAA
GCAGCATGTA AGCTATTTAA ACGTAGCCTA GAACAGCTAA AACGTTCTTC CGCTGATGAG
CTAATTGCAC CTAAGTTCCT TACGGTTAAG CAGCCGCACT ACTGTGGCAA GATTGATATC
TACATCGAAG ATATTCGTCA AAACATTGAA GCAGACATCC TCAAGCTGCC TGAAGGCTCT
GGTTTAGATG TCATGTATAT CTTCAATGTA GGAGGCGGAG CGAATGCAGC TCGTATCCAT
AACCTAGAGA CGGCAGTTGA AGTACTTTCA AGTTACGCAT TTGATGGTGA TAAAGACCAG
CTGCAGAAGC TGAAAGAACT TGGCGGTGAG TTTACTCGCC TTGCTGATAA AGCATTGGGT
AACAAGAAGG ACAAACAAGA GCTGATGCGC GAAGTATTAG TCGATACGAT GACTCATGCA
TTGGAATATT GGGAATCGGT GACTGGAGAA ACCAAGTTTG CCTTTGCTGA ACAAAGTGGT
TTATGGCGCG TCTACCTCGA CCGCAGTACA TTGCAAACAC GTACGCTCGA TAAATACATG
CGTATTGAGA CTTTGCCTAA GACACCACGC TGGAGGACAG TACTAAGCTC AATTGAGTTC
ATTCTGGAGC ACTGTAAAGA ACAAAGCCCA GAACGCGCTT ACATAGAGGC ACAGCGCGAT
AAGATGCAAA GACTCCTTAC GAGCTAA
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| Protein sequence | MFKFYKKQKF KRLQSTLMTA FLVLSITPLT ITAIFFLQSH TKDLEEQSTS HLLSVRDTKQ
QQIIDYFAAQ ETEVMGFVRS ELAYASGGRF YGLVNAFSRL GHDIDEAREN AQQRYIKGSG
DQIKTSILPE SSNYVGSERY RLLHKRYHWA YLELLKRSDF NDILLVDIDG NVTYSINKDD
NFGTNLLSGR YKDTALGKTF KRLSEDVSAR RKVNEDYTPV VVSDFDIENG KQVAWLGAPI
VQQGYLHSYA MFRLPNNGIT KLIAEINRDS SIDTLLVGSD HKPRTINTKQ EDIQNSLEIV
DKALAGETEV GTYSNRLGEE MIAAFAPIET RGLTWALVVQ LPEKEAFARV HQLEKLFVIA
MLIAIILVVI ASHYLSNFIT SPLLKLTWAA EKVSAGDLDE TTFNTERKDE IGRLAISFER
MQRSIREKIQ TIKQQNEELE SNIKLIQKQN EELQLADKLK DEFLATTSHE LRTPLHGMVG
IAETLVSGAN GAIPASQKYQ LDIIIKSGQR LANLVDDLLD YHKMRYGSMD IQKSAVSLAS
ATRLVLELSG HLLGNKTIRI INQVPADLKA VSADPQRLEQ VLYNLIGNAI KYTSEGKIVI
SATVVDDQVR VQVVDTGQGI PAEHLEHIFE PLIQAGQDAS RYRQGAGLGL SISRQLIELM
GGSLYVSSQP MVGTTFSFTL PLASEEEIKA TESLAARGHF QIPEANFDNN DDLSLPENPD
GPLLYVADDE PVNLRVLESF LRLEGYRVRT ISDGPETLAL IEQEKPELLL LDIMMPGMSG
YQVCSELRET YDHAELPIIM LTALSQTEDR VRGFEAGAND YLTKPFNKQE LAARIQAHLT
ASQAEMRHIE NKLLESELRQ RAEVEASLLE TQGRLLEQLE SAPEAIICLR EDQRIRFANE
AACKLFKRSL EQLKRSSADE LIAPKFLTVK QPHYCGKIDI YIEDIRQNIE ADILKLPEGS
GLDVMYIFNV GGGANAARIH NLETAVEVLS SYAFDGDKDQ LQKLKELGGE FTRLADKALG
NKKDKQELMR EVLVDTMTHA LEYWESVTGE TKFAFAEQSG LWRVYLDRST LQTRTLDKYM
RIETLPKTPR WRTVLSSIEF ILEHCKEQSP ERAYIEAQRD KMQRLLTS
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