| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03412 |
|---|
| Symbol | |
|---|
| ID | 5553208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3449739 |
|---|
| End bp | 3450926 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908892 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_001446584 |
|---|
| Protein GI | 156975677 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCA TTGAAGCTGC ATTAGCCGAG ATTAAGCGCG GTGTTGAAGA GCTGATTCCA
GAAGAAGAGC TGATCGCAAA ACTAAAAGAA GGTCGTCCTC TACGTATTAA ATTGGGCGCC
GATCCAACAG CACCTGACAT TCACCTAGGC CATACGGTTA TTTTCAATAA GCTTCGCTTG
TTCCAAGAAC TAGGTCATGA AGTGACGTTC CTAATCGGTG ACTTCACTGC AATGGTTGGT
GACCCAACAG GTAAGAACTC AACTCGTCCT CCGCTAAGCC GTGAAGATGT TCTGCGTAAC
GCAGAAACGT ACAAAGAGCA GGTGTTCAAA ATCCTAGATC CAGCTAAGAC AAAAATTCAG
TTCAACTCTG AGTGGCTATC TGAGCTTGGC GCAGAAGGTA TGATTCGCCT TGCAGCGAAC
CAAACCGTTG CTCGTATGCT AGAACGTGAT GACTTTAAAA AGCGTTACGC TGGTGGCCAG
CCAATCGCTA TTCATGAGTT CATGTACCCA CTACTTCAAG GTTGGGACTC AGTAGCAATG
GAAACGGACG TTGAGCTTGG TGGTACTGAC CAGAAGTTCA ACCTACTAAT GGGTCGTGAA
CTGCAAAAAT CTCACGGTCA AAAACCTCAA GTTGTACTGA TGATGCCGCT TCTAGTAGGT
CTAGATGGTG AGAAGAAGAT GTCTAAGTCT TCTGGTAACT ACATTGGTAT CAGCGAAGCA
CCAAGCGAAA TGTTTGGTAA GATCATGTCT ATTTCTGACG TTCTAATGTG GAGCTACTAC
GAGCTACTGT CTTTCCGTCC ATTGGAAGAA ATTGCACAGT TTAAAGCTGA CGTAGAAGCG
GGTAAGAACC CTCGCGATAT TAAAGTTCTG CTAGCGAAAG AAATCATTGC TCGTTTCCAC
AGTGAAGCGG ATGCAGATGC AGCAGAGCAA GAGTTCGTGA ACCGTTTTGC TAAGAACCAA
ATCCCTGACG AAATGCCAGA GTTTGATTTT GAGGCTGGCA CGCCAGTAGC AAACCTACTG
AAAGAAGCGG GTCTATGTGC TTCAACTTCT GAAGCAATGC GCATGGTTAA GCAAGGTGCT
GCTAAGATTG AAGGCGAGAA AGTTGCTGAT GCGAAGTTTG CTCCTGAAGT AGGCACTTAC
GTATTCCAAG TAGGTAAACG TAAATTCGCA CGTATTACTA TCAAGTAA
|
|---|
| Protein sequence | MASIEAALAE IKRGVEELIP EEELIAKLKE GRPLRIKLGA DPTAPDIHLG HTVIFNKLRL
FQELGHEVTF LIGDFTAMVG DPTGKNSTRP PLSREDVLRN AETYKEQVFK ILDPAKTKIQ
FNSEWLSELG AEGMIRLAAN QTVARMLERD DFKKRYAGGQ PIAIHEFMYP LLQGWDSVAM
ETDVELGGTD QKFNLLMGRE LQKSHGQKPQ VVLMMPLLVG LDGEKKMSKS SGNYIGISEA
PSEMFGKIMS ISDVLMWSYY ELLSFRPLEE IAQFKADVEA GKNPRDIKVL LAKEIIARFH
SEADADAAEQ EFVNRFAKNQ IPDEMPEFDF EAGTPVANLL KEAGLCASTS EAMRMVKQGA
AKIEGEKVAD AKFAPEVGTY VFQVGKRKFA RITIK
|
|---|
| |