| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03390 |
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| Symbol | vmrA |
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| ID | 5553201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3426358 |
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| End bp | 3427704 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640908870 |
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| Product | multidrug efflux pump VmrA |
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| Protein accession | YP_001446564 |
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| Protein GI | 156975657 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACT CTATATACAA ACAGTTTTGG AAATACACAA TTCCGACCGT CGCAGCCATG
CTGGTTAACG GTCTGTATCA AGTGGTGGAT GGTATCTTTA TCGGTCGGTA TGTCGGTGCT
GACGGATTAG CGGGGATCAA CGTTGCTTGG CCAATTATCG GCTCGATACT CGGTATCGGT
ATGATGGTGG GTGTAGGTAC GGGCGCACTC GCCTCTATCA AACAAGGTGA AAAAGACAGT
GAGGGCGCGA AACGCATTCT CTCAACTGGT CTATTGCTTT TAGTCGCTCT GATGCCAATA
GTGGCGGCAA CCTTGTTGTT CTTCGCCGAT GACTTTATTC GCTGGCAGGG CGCTGAAGGC
CGTGTTTACG AGCTCGGTTT GCAGTACCTG CATATCCTGA GTGTCGCGTG TGTGTTCTCG
CTGGGTTCGA TTGCATTACC GTTTTTGCTG CGTAATGATG ATAGCCCTAA CTTAGCCACC
ATCTTGATGG TGATCGGCGC GGTAATCAAT ATCGTGCTCG ACTATATGTT TATCGCTTGG
CTGGGCTGGG AGCTTACCGG TGCTGCTATT GCGACCGCTC TGGCGCAGAT GGTTGTGACG
ATTTTGGGTG TGGGGTACTT CTTTACTTCC AGAGCCAACA TGCGCTTGTC TTTCAGCGAT
TTGAAGATGC AGTTTGATGT CATTCCTAAG ATTGTCATGA TAGGCACGTC TAGCTTCTTT
ATGTACGCTT ATGGCTCAAT GATGGTCGCA CTGCATAACG CGCTGTTTGC CCAGTACGGT
AGTGCGTTGT TAATTGGTGC TTACGCCATC TTGGGTTATA TCGTGACGGT CTATTACTTG
ATCGCGGAAG GCATCGCCAA TGGTATGCAG CCCTTAGTGA GCTACAACCA TGGTGCTCGC
AACCAAAGTA ACATTCGTAA ACTGTTGAAG GTCGCAATGG GCACGTCAGT TCTCGGTGGT
GTCGCGTTTG TTATTCTGAT GAACATCTTC CCTTACGAAT TTGTGTCGGT GTTCAACAAC
GCAGACCAAC ATCTGATTGA TGCGACAGTG GTCGGTATCC GTCTACACAT GTTTGCGCTG
TTCTTAGATG GCTTCTTGGT GGTTGCGGCG GCGTACTACC AATCGGTAAA CAAAGGCAGC
AAAGCGATGT TTGTGACCAT TGGTAATATG GTGATTCAAT TGCCTTTCTT GTTCATCATG
CCGAAGTTAT TGGGAGTGAC GGGTATTTGG ATTGCGTTCC CATTGTCTAA CATCGCCTTG
AGTCTGGTGG TGATGACAAT GTTGTGGCGT GATATTAAGA AGTTAATGAA TGAGAGCTCT
CCAGAGCCAA GTGTTCAAGT CTCTTAA
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| Protein sequence | MQNSIYKQFW KYTIPTVAAM LVNGLYQVVD GIFIGRYVGA DGLAGINVAW PIIGSILGIG
MMVGVGTGAL ASIKQGEKDS EGAKRILSTG LLLLVALMPI VAATLLFFAD DFIRWQGAEG
RVYELGLQYL HILSVACVFS LGSIALPFLL RNDDSPNLAT ILMVIGAVIN IVLDYMFIAW
LGWELTGAAI ATALAQMVVT ILGVGYFFTS RANMRLSFSD LKMQFDVIPK IVMIGTSSFF
MYAYGSMMVA LHNALFAQYG SALLIGAYAI LGYIVTVYYL IAEGIANGMQ PLVSYNHGAR
NQSNIRKLLK VAMGTSVLGG VAFVILMNIF PYEFVSVFNN ADQHLIDATV VGIRLHMFAL
FLDGFLVVAA AYYQSVNKGS KAMFVTIGNM VIQLPFLFIM PKLLGVTGIW IAFPLSNIAL
SLVVMTMLWR DIKKLMNESS PEPSVQVS
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