Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03378 |
Symbol | |
ID | 5553153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3415008 |
End bp | 3416291 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908858 |
Product | hypothetical protein |
Protein accession | YP_001446552 |
Protein GI | 156975645 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGT TTATGAGCCT AGTCGGTATG GTAGTGCTTC TTGCTATTGC ATTTGCATTC TCATCTAACC GCAAAGCTAT CAACTTTAGA ACTGTGGGTG GCGCATTTGC TATCCAATTC ATCCTTGGTG CATTTGTTCT TTACGTACCT TGGGGCCGTG ATCTACTAAA CGGTTTCTCC ACTGGTGTTT CTAACGTTAT CAACTACGGT AACGATGGTT CATCTTTCCT ATTCGGTGGT CTTGTTTCTG ACAAGATGTT CGAAGTATTC GGCGGCGGCG GCTTCATCTT CGCATTCCGC GTTCTTCCTA CACTGATCTT CTTCTCTGCA CTGATTTCAG TTCTTTACTA CATTGGCGTA ATGCAGTGGG TTATCAAGAT TCTTGGTGGT GCACTACAAA AAGCACTTGG CACTTCTCGT GCGGAATCAA TGTCTGCAGC AGCTAACATT TTCGTAGGTC AAACTGAAGC ACCTCTAGTT GTTCGCCCAT TCGTACCAAA AATGACTCAA TCTGAGCTAT TCGCGGTAAT GTGTGGTGGT CTAGCATCTG TAGCTGGTGG TGTACTAGCA GGTTACGCTT CAATGGGTGT TCCTCTAGAG TACCTAGTAG CAGCATCATT CATGGCAGCA CCGGGTGGTC TACTATTCGC TAAGATTCTT CACCCAGAGA CTGACCAGCC TCACGAAGAC ATCGAAGAAG CAATGGACGG TGGTGACGAC AAGCCAGCTA ACGTAATCGA CGCAGCAGCG GGCGGTGCGG CTTCTGGTCT ACAACTAGCA CTAAACGTTG GTGCAATGCT AATCGCGTTC GTAGGTCTTA TTGCTCTTAT CAACGGTATG CTAGGTGGCA TCGGTGGTTG GTTCGGTATG CCTGAACTAA CACTAGAACT TATCCTAGGC TACGCGTTCT CTCCACTAGC ATTCCTAATC GGTGTTCCAT GGGACGAAGC AGTTGTTGCT GGTTCATTCA TCGGTCAGAA ACTAGTAATC AACGAATTCG TTGCATACTT GAACTTCACA CCTTACCTAG GTGAAGGCGC TCAAGTTGTT GCAGCTACTG GTGAAGTAAT GTCTGCTAAG ACAACAGCTA TCATCTCATT CGCACTATGT GGCTTCGCGA ACCTTTCTTC TATCGCGATT CTACTTGGTG GTCTAGGTAG CCTTGCACCA AACCGTCGTT CAGATATCGC TCGCATGGGT ATTAAAGCTG TTCTTGCTGG TACGTTGTCT AACCTAATGG CAGCGACTAT CGCAGGCTTC TGCCTTAGCC TTGCAGCACT TTAA
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Protein sequence | MSLFMSLVGM VVLLAIAFAF SSNRKAINFR TVGGAFAIQF ILGAFVLYVP WGRDLLNGFS TGVSNVINYG NDGSSFLFGG LVSDKMFEVF GGGGFIFAFR VLPTLIFFSA LISVLYYIGV MQWVIKILGG ALQKALGTSR AESMSAAANI FVGQTEAPLV VRPFVPKMTQ SELFAVMCGG LASVAGGVLA GYASMGVPLE YLVAASFMAA PGGLLFAKIL HPETDQPHED IEEAMDGGDD KPANVIDAAA GGAASGLQLA LNVGAMLIAF VGLIALINGM LGGIGGWFGM PELTLELILG YAFSPLAFLI GVPWDEAVVA GSFIGQKLVI NEFVAYLNFT PYLGEGAQVV AATGEVMSAK TTAIISFALC GFANLSSIAI LLGGLGSLAP NRRSDIARMG IKAVLAGTLS NLMAATIAGF CLSLAAL
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