Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03377 |
Symbol | |
ID | 5553169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 3413651 |
End bp | 3414427 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908857 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001446551 |
Protein GI | 156975644 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATT TAAAAGCAGC AGCGCTACGT GCACTGAAAC TTATGGACCT TACTACGCTA AATGATGATG ACACTGATGC AAAAGTGATC TCACTATGTC ATGACGCGAA ATCAGCAGTA GGCAACACAG CTGCAATCTG TATTTACCCT CGCTTTATTC CTATTGCTAA GAAGACACTT CGCGAGCAAG GTACGCCTGA AGTTCGTATC GCAACGGTAA CGAACTTCCC ACACGGTAAC GACGACATCG AAATCGCCGT TGCTGAAACA AAAGCGGCGG TTGCTTACGG TGCAGACGAA GTAGACGTAG TTTTCCCATA CCGCGCTCTA ATGGCGGGTG ATGAGAAAGT TGGCTTCGAA CTAGTTAAGC AATGTAAAGA AGCTTGTGGT GATATCCTTC TTAAAGTCAT CATCGAAACA GGTGAGCTTA AAGAAGAAGC ACTCATCAAG AAAGCATCTC AAATCTGTAT CGAAGCAGGT GCTGACTTCA TTAAAACTTC AACTGGTAAA GTGCCAGTAA ACGCAACACC AGAATACGCT CGTATGATGC TTGAAGTTAT TCGTGACATG GGTGTTGCAG AAACTGTTGG TTTCAAACCA GCAGGTGGTG TGCGCACTGC TGAAGATGCA GCGGCATACC TAGCAATGGC TGACGAAATC CTTGGTGACA ACTGGGTTGA TGCTCGTCAC TACCGTTTCG GTGCGTCTAG CCTGCTAACA AACCTACTTA ATACATTAGA AGTATCGGAC GAAGTCGCTG ATCCAGCAGC GTACTAA
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Protein sequence | MSDLKAAALR ALKLMDLTTL NDDDTDAKVI SLCHDAKSAV GNTAAICIYP RFIPIAKKTL REQGTPEVRI ATVTNFPHGN DDIEIAVAET KAAVAYGADE VDVVFPYRAL MAGDEKVGFE LVKQCKEACG DILLKVIIET GELKEEALIK KASQICIEAG ADFIKTSTGK VPVNATPEYA RMMLEVIRDM GVAETVGFKP AGGVRTAEDA AAYLAMADEI LGDNWVDARH YRFGASSLLT NLLNTLEVSD EVADPAAY
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