Gene VIBHAR_03363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03363 
Symbol 
ID5553435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3394479 
End bp3396170 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content47% 
IMG OID640908843 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001446537 
Protein GI156975630 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAGC CTAACGAGTT AAGTGAGCAG ACTTGCGCTC TCCCACCACC AAATGAAATG 
ATTCTCAAAT GGGCAGCGGA ACGCCCAGAT GAAGTCTATT TAAAACAAAT CATCAACCGA
CAGTTCGTTG AGTTCACTTA TGCGGAAGTT GCCGATCAAG CGTTAAGACT TGTCAGTGCT
TTACGTAACC TTGGTGTACA GCCAGGCGAT AAAGTGGCCT TAGTCTCGAA AAACTGTGCC
GAATGGTTCA TCTGTGATTT GGCAATGATG CTGGGCGATT ACGTTAGCGT GCCTATTTTC
CCAACAGCTG GTGCGGATAC AATCGAGTAC TGTGTGACAC ACAGTGAGAG TAAAGCTCTG
ATCGGCGGTA AGTTAGATGA TCCAGCGGCA ACGCAACAAG TGATCGATTC AATGCCAGAT
TTAATTAACA TTGCACTTCC TTACGATACT GCGCCGAAAT GCCAATATCA GTTTACTAAG
ATTATTACCG ATGTAGAACC AAGCGCAGAG CGTCCACAAC ACCATGATGA CAAGCTCATG
TCTCTCGTGT ACACCTCAGG AACGTCAGGT CTGCCGAAAG GGGCAATGCT GACATACGGT
GCGTTCAGTT GGTCAGTTCA GCAGTTAATT AATCATATTG GGATTCAAGA AAACGACCGA
TTGTTCTCTT ATTTGCCACT TGCTCACATT ACTGAGCGTG TATACATCTT CGGCTCATCC
ATTATGGGTG GTGTAACTAC GGCTTTCCCA GAGTCTCTCG ATACCTTTAT CGAAGATGTA
AAAATGCATC GTCCGACACT GTTTATTTCC GTGCCTCGTT TGTGGACCTT GTTCCAGCAA
CGTATTCAAG ACAAACTTCC GCAGAAAAAG CTCAACATTC TACTGAAGAT CCCGTTCATT
AACTCACTTA TCAAGAAGAA GCTGGCAGAT GGCCTTGGTT TAGATCAAGC GCGTGTTCTT
GGTTGTGGCT CTGCGCCTGT ATCACCGGCA TTGCTCGAGT GGTATCGCAG CGTAGGCTTA
AACATCACGG AAGCTTGGGG CATGACGGAG TCTTTCGCCT ACAGCACACT TAACTACCCA
TTCCGTGCCG ATAAAATTGG CTCAGTAGGT AATGCCGGCC CTGGCATTGA ACTGAAGATC
GCTGACGATG AAGAAATCAT GGTCCGTGGT AAAGGCTTGT TCTCAGGTTA CTACAAAAAC
GATATCGCCA CACAAGAGTC GTTTGACTCC AAAGGGTGGC TGCACACGGG TGACATCGGC
TCAATCGATG CGGATGGTTA TCTCACTATC CAAGGCCGTA AGAAGGACAC CTTCAAAACT
TCAAAAGGTA AGTTCGTAGC ACCGGTTCCT ATTGAGAAGA AACTGTTCGA ATACAGCCGC
GTCGAAATGA TGTGTTTGAT CGGCCTAGGC TTGCCAGGGC CAATCTTGTT GGTTGTACCT
CACGATTTCC CGAACTTCGA TAAAGAACGC TACGCACGAA CGACTCGCAA AGTGATCGCT
CGTATGAACC AAGAACTGGA ATCACACGAG CAAATAAAAG GTGTGCTGAT GATTCAAGAG
CCGTGGAGTA TCGAGAACGG TATTCTAACA CCGACCTTGA AGATTAAACG CCATGTCCTA
GAACAGAAGT ACCATGAACT TGGCCACAAC TGGCCAAAAG GCGAGCTGGT TGTTTGGGAA
GAAGAATTAT AA
 
Protein sequence
MIQPNELSEQ TCALPPPNEM ILKWAAERPD EVYLKQIINR QFVEFTYAEV ADQALRLVSA 
LRNLGVQPGD KVALVSKNCA EWFICDLAMM LGDYVSVPIF PTAGADTIEY CVTHSESKAL
IGGKLDDPAA TQQVIDSMPD LINIALPYDT APKCQYQFTK IITDVEPSAE RPQHHDDKLM
SLVYTSGTSG LPKGAMLTYG AFSWSVQQLI NHIGIQENDR LFSYLPLAHI TERVYIFGSS
IMGGVTTAFP ESLDTFIEDV KMHRPTLFIS VPRLWTLFQQ RIQDKLPQKK LNILLKIPFI
NSLIKKKLAD GLGLDQARVL GCGSAPVSPA LLEWYRSVGL NITEAWGMTE SFAYSTLNYP
FRADKIGSVG NAGPGIELKI ADDEEIMVRG KGLFSGYYKN DIATQESFDS KGWLHTGDIG
SIDADGYLTI QGRKKDTFKT SKGKFVAPVP IEKKLFEYSR VEMMCLIGLG LPGPILLVVP
HDFPNFDKER YARTTRKVIA RMNQELESHE QIKGVLMIQE PWSIENGILT PTLKIKRHVL
EQKYHELGHN WPKGELVVWE EEL