Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03363 |
Symbol | |
ID | 5553435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3394479 |
End bp | 3396170 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908843 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001446537 |
Protein GI | 156975630 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCAGC CTAACGAGTT AAGTGAGCAG ACTTGCGCTC TCCCACCACC AAATGAAATG ATTCTCAAAT GGGCAGCGGA ACGCCCAGAT GAAGTCTATT TAAAACAAAT CATCAACCGA CAGTTCGTTG AGTTCACTTA TGCGGAAGTT GCCGATCAAG CGTTAAGACT TGTCAGTGCT TTACGTAACC TTGGTGTACA GCCAGGCGAT AAAGTGGCCT TAGTCTCGAA AAACTGTGCC GAATGGTTCA TCTGTGATTT GGCAATGATG CTGGGCGATT ACGTTAGCGT GCCTATTTTC CCAACAGCTG GTGCGGATAC AATCGAGTAC TGTGTGACAC ACAGTGAGAG TAAAGCTCTG ATCGGCGGTA AGTTAGATGA TCCAGCGGCA ACGCAACAAG TGATCGATTC AATGCCAGAT TTAATTAACA TTGCACTTCC TTACGATACT GCGCCGAAAT GCCAATATCA GTTTACTAAG ATTATTACCG ATGTAGAACC AAGCGCAGAG CGTCCACAAC ACCATGATGA CAAGCTCATG TCTCTCGTGT ACACCTCAGG AACGTCAGGT CTGCCGAAAG GGGCAATGCT GACATACGGT GCGTTCAGTT GGTCAGTTCA GCAGTTAATT AATCATATTG GGATTCAAGA AAACGACCGA TTGTTCTCTT ATTTGCCACT TGCTCACATT ACTGAGCGTG TATACATCTT CGGCTCATCC ATTATGGGTG GTGTAACTAC GGCTTTCCCA GAGTCTCTCG ATACCTTTAT CGAAGATGTA AAAATGCATC GTCCGACACT GTTTATTTCC GTGCCTCGTT TGTGGACCTT GTTCCAGCAA CGTATTCAAG ACAAACTTCC GCAGAAAAAG CTCAACATTC TACTGAAGAT CCCGTTCATT AACTCACTTA TCAAGAAGAA GCTGGCAGAT GGCCTTGGTT TAGATCAAGC GCGTGTTCTT GGTTGTGGCT CTGCGCCTGT ATCACCGGCA TTGCTCGAGT GGTATCGCAG CGTAGGCTTA AACATCACGG AAGCTTGGGG CATGACGGAG TCTTTCGCCT ACAGCACACT TAACTACCCA TTCCGTGCCG ATAAAATTGG CTCAGTAGGT AATGCCGGCC CTGGCATTGA ACTGAAGATC GCTGACGATG AAGAAATCAT GGTCCGTGGT AAAGGCTTGT TCTCAGGTTA CTACAAAAAC GATATCGCCA CACAAGAGTC GTTTGACTCC AAAGGGTGGC TGCACACGGG TGACATCGGC TCAATCGATG CGGATGGTTA TCTCACTATC CAAGGCCGTA AGAAGGACAC CTTCAAAACT TCAAAAGGTA AGTTCGTAGC ACCGGTTCCT ATTGAGAAGA AACTGTTCGA ATACAGCCGC GTCGAAATGA TGTGTTTGAT CGGCCTAGGC TTGCCAGGGC CAATCTTGTT GGTTGTACCT CACGATTTCC CGAACTTCGA TAAAGAACGC TACGCACGAA CGACTCGCAA AGTGATCGCT CGTATGAACC AAGAACTGGA ATCACACGAG CAAATAAAAG GTGTGCTGAT GATTCAAGAG CCGTGGAGTA TCGAGAACGG TATTCTAACA CCGACCTTGA AGATTAAACG CCATGTCCTA GAACAGAAGT ACCATGAACT TGGCCACAAC TGGCCAAAAG GCGAGCTGGT TGTTTGGGAA GAAGAATTAT AA
|
Protein sequence | MIQPNELSEQ TCALPPPNEM ILKWAAERPD EVYLKQIINR QFVEFTYAEV ADQALRLVSA LRNLGVQPGD KVALVSKNCA EWFICDLAMM LGDYVSVPIF PTAGADTIEY CVTHSESKAL IGGKLDDPAA TQQVIDSMPD LINIALPYDT APKCQYQFTK IITDVEPSAE RPQHHDDKLM SLVYTSGTSG LPKGAMLTYG AFSWSVQQLI NHIGIQENDR LFSYLPLAHI TERVYIFGSS IMGGVTTAFP ESLDTFIEDV KMHRPTLFIS VPRLWTLFQQ RIQDKLPQKK LNILLKIPFI NSLIKKKLAD GLGLDQARVL GCGSAPVSPA LLEWYRSVGL NITEAWGMTE SFAYSTLNYP FRADKIGSVG NAGPGIELKI ADDEEIMVRG KGLFSGYYKN DIATQESFDS KGWLHTGDIG SIDADGYLTI QGRKKDTFKT SKGKFVAPVP IEKKLFEYSR VEMMCLIGLG LPGPILLVVP HDFPNFDKER YARTTRKVIA RMNQELESHE QIKGVLMIQE PWSIENGILT PTLKIKRHVL EQKYHELGHN WPKGELVVWE EEL
|
| |