Gene VIBHAR_03266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03266 
Symbol 
ID5554761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3291442 
End bp3292734 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content48% 
IMG OID640908747 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001446441 
Protein GI156975534 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA TCTGCTCCTC AACCAACCTG AATCAAGCTT TACGAAGAGT GAAGAAGAAC 
AAGGGATGTG CAGGTGTCGA CAAACTCGAC ATAGATGCAA CTATCTTTAA GCTTCGACAA
GCTTCAAACG GGCAAGCGCT TCGCCAGAGT CTTCTGGATG GAAGCTACCG ACCTCAACCC
GTTCTTGGTG TGGGAATCCC CAAACCGAGT GGTGGCGTCA GACAACTAGG TATCCCAACA
GTGCTCGATA GAATTGTCCA ACAGGCAATC ACCTCAGTAC TGTCAGATAT CTATGAAGCT
AAGTTCTCCA ATAGCAGTTA CGGATTTAGA CCCAACCGCA GTGCACATCA TGCGCTAGCG
GCAGCCAGTC GCTACATCCG AGAGGGGCGA GGTTATGTAG TAGATATCGA CCTAGCGAAA
TACTTCGATA CCGTTAATCA CGATAGACTG ATGCACAGAC TGTCAGAGGA TATCGCGGAT
AAACGAGTGT TGAAGCTCAT CAGGTCATAT CTACAGGCAG GCATAATGCG AAACGGTTTA
GTCGAACAGA GACAACGAGG GACACCACAG GGTGGTCCAT TATCTCCGTT GCTATCCAAT
ATCGTATTAG ATGAACTGGA TAAAGAGCTA GAGCGTAGAG GGCATAAGTT CTGTCGATAT
GCAGACGACT GTCAAATCTA TGTTGGTAGT GAGGAAGCCG CTTATCGAGT GAAAGAGTCG
ATAACGGAGT ACTTGGAGCA AAAACTGAAA CTCACGGTAA ACCGAGAGAA AAGTGCAGCA
ACAAGAGTGA CAGAGCGAAC TTACCTAAGC CACCGCTTCG GGATAGATGG GACAATCCAT
ATATCGAAGC CAGCGCAAAC TCAAATGAAG ACGCGAGTTC GGCAGATAAC GAAGCGAAAC
CGAGGTCGAG AGTTAAAGGT GGTAATCGCC GAGTTAACTC AATACCTAAG AGGTTGGCAA
GACTACTTCA AACTCGCCAT ACGGAAGAGC AGCATGAAGC GCTTGGACGA ATGGATACGG
CGACGGCTAA GATGTTATCG ACTTAAGCAA CGCAAACACA GATACGGCAT AGTGACATGG
TTACAGCGAC AAGGTGTAAC AGAGCGTAAT GCGTGGAAGT TAGCGATGTC AGATAAAGGT
TGGTGGCGGC TAGCATTAAC GCCCCAGACA AATCACGCTA TGCCAACAAA ATGGTTCGAG
GAGTTGGGTC TGTACTCGTT GCGAGATGGG TATGAGTCAC TAAAAGTATA TTCGGAACCG
CCGTATGCGA CCCACGCTTG TACGGTGGTG TGA
 
Protein sequence
MEQICSSTNL NQALRRVKKN KGCAGVDKLD IDATIFKLRQ ASNGQALRQS LLDGSYRPQP 
VLGVGIPKPS GGVRQLGIPT VLDRIVQQAI TSVLSDIYEA KFSNSSYGFR PNRSAHHALA
AASRYIREGR GYVVDIDLAK YFDTVNHDRL MHRLSEDIAD KRVLKLIRSY LQAGIMRNGL
VEQRQRGTPQ GGPLSPLLSN IVLDELDKEL ERRGHKFCRY ADDCQIYVGS EEAAYRVKES
ITEYLEQKLK LTVNREKSAA TRVTERTYLS HRFGIDGTIH ISKPAQTQMK TRVRQITKRN
RGRELKVVIA ELTQYLRGWQ DYFKLAIRKS SMKRLDEWIR RRLRCYRLKQ RKHRYGIVTW
LQRQGVTERN AWKLAMSDKG WWRLALTPQT NHAMPTKWFE ELGLYSLRDG YESLKVYSEP
PYATHACTVV