Gene VIBHAR_03238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03238 
Symbol 
ID5555903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3264644 
End bp3265522 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content46% 
IMG OID640908719 
Productmethionine aminopeptidase 
Protein accessionYP_001446414 
Protein GI156975507 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCA AGATTAAAAC TGCTGAAGAA ATCGAACGCA TGCGTATTGC GGGCAAGCTA 
GCCGCAGATA CTCTAGAAAT GATCGAACCC CATATTAAAG CGGGTGTGAC GACAGACGAA
TTAAACCAAA TCTGTCACGA TTACGCTCTA GAGCGAGGCG CTTACTCTGC ACCGCTTGAT
TACCATGGAT TCCCTAAATC AATCTGTACG TCAATCAACC ACATCGTTTG TCACGGTATT
CCTGCGGCGC AAGACGAAAA AGGTGCAAAC GGCCAAATGA AGCCAGCTGT ACTTAAAGAT
GGCGACATCA TCAATGTTGA TATCACGGTT ATCGTTCCTA ACGATGAAAA CGCAGACCTA
AGCGTTCGTC CACAAGGTTA CCACGGTGAC ACTTCTAAGA TGTTCCTAGT TGGTGATGTA
TCACCTGCAA ACAAACGTCT GTGCATGGTG GCTCAAGAGT CTCTGTACAT CGGTATGCGT
CAAGTGAAGC CTGGCGCAAC GGTTGGTGAC ATCGGTACCG CTATCGAGAA GTACATCAAA
GAAAACAATA AGAACAACCC TCGTAACAAG TTCTCTATTG TGAAAGACTT CTGTGGTCAC
GGTATCGGCG ATGAGTTCCA CGAAGAGCCA CAAGTAGTTC ACTACAAGAA CAAAGACCGC
CGCGTACTGA AAGAAGGTAT GTGCTTTACT ATCGAGCCAA TGATCAACGC AGGTAAGTTC
GGTTGTACTG TTGACGCTCA AGACGACTGG ACGGTTTACA CTGGCGACGG TAAAAACTCA
GCACAGTGGG AACACACTAT CGTGGTAACC AAAGAGGGTT GTGAAGTACT AACACTTCGT
AGCGACGATA CCATTCCACG AATGATGAAA AACGTCTAA
 
Protein sequence
MSIKIKTAEE IERMRIAGKL AADTLEMIEP HIKAGVTTDE LNQICHDYAL ERGAYSAPLD 
YHGFPKSICT SINHIVCHGI PAAQDEKGAN GQMKPAVLKD GDIINVDITV IVPNDENADL
SVRPQGYHGD TSKMFLVGDV SPANKRLCMV AQESLYIGMR QVKPGATVGD IGTAIEKYIK
ENNKNNPRNK FSIVKDFCGH GIGDEFHEEP QVVHYKNKDR RVLKEGMCFT IEPMINAGKF
GCTVDAQDDW TVYTGDGKNS AQWEHTIVVT KEGCEVLTLR SDDTIPRMMK NV