Gene VIBHAR_03231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03231 
Symbol 
ID5554297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3258040 
End bp3259245 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID640908712 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_001446407 
Protein GI156975500 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGT TAACGATTCT TGGTGCAACA GGCTCAATCG GTGCAAGCAC ACTTAAAGTG 
GTTGAACAAA ACCCTGAGCT GTTTTCTATC GTCGCATTAG CGGCAAGCAC TAACGTTGAA 
AAGATGGTCG CGCTCTGCCG TAAATGGCAA CCAAAATACG CTGTGATGGC GGATAAAGCG 
GCGGCATTGG CTCTGCAATC AGAACTGGCT TCTGTCTCGC CAAGCACTGA GGTGCTAGGT 
GGTGTTGATG CGCTTTGTCA TGTGTCTGCC TTAGAAGAAG TCGACAGCGT GATGGCGGCT 
ATCGTTGGTG CGGCTGGTTT GCTACCAACG ATGGCGGCAG TGAAAGCCGG CAAGCGTGTG 
CTATTGGCAA ACAAAGAAGC ACTGGTGATG TCCGGTCAAC TGTTCATTGA CGCAGTAGAA 
GAACATGGCG CAGAGCTACT TCCAGTAGAC AGCGAGCACA ACGCGATCTT CCAGTGTTTA 
CCTCAGCAAG TTCAAACCAG CCTAGGTCGT TGTAACTTAG AGGAGCATGG TATTTCATCA 
ATTCTGCTAA CTGGTTCTGG CGGTCCATTC CGTTATACCG ACATCGCAGA GCTAGAGAAA 
GTAACCCCAG CACAAGCGAT TGCTCACCCG AACTGGTCAA TGGGTCCTAA GATCTCGGTT 
GATTCAGCAA CCATGATGAA CAAAGGTCTT GAGTACATTG AAGCGAAATG GCTGTTTAAT 
GCGGCTCGTG AACAGTTGAA GGTGATTATT CACCCTCAGT CGGTGATTCA CTCAATGGTG 
CAATACCGAG ACGGTTCAGT CTTGGCGCAA ATGGGCGAAC CTGATATGGC AACTCCGATT 
GCGTTGACTA TGTCTTACCC ATCTCGTGTG GATGCTGGTG TGAAACCACT CGACGTTACT 
CAAGTGGGCG AGTTGACGTT CCTTCAACCC GATTTTGCTC GCTACCCATG TTTGAAGTTG 
GCGATTGATG CGTGTTACGA AGGCCAACAT GCTACGACCG CTCTGAATGC AGCGAACGAA 
GTCGCAGTGG ATGCTTTCTT AAATAACCGC TTAGGTTTCA CTGATATCGC TCGCATCAAT 
GAATCAGTTT TGAACAAAAT CACGGCAAGC CATAAAAGTG AGAATGTGAA TAGCTTGGAA 
AGCTTGATAG AGCTAGATAG AATGTCACGA ACTATCGCCT TAGAATTTTT ACGCGAGCGT 
AGCTAA
 
Protein sequence
MQKLTILGAT GSIGASTLKV VEQNPELFSI VALAASTNVE KMVALCRKWQ PKYAVMADKA 
AALALQSELA SVSPSTEVLG GVDALCHVSA LEEVDSVMAA IVGAAGLLPT MAAVKAGKRV 
LLANKEALVM SGQLFIDAVE EHGAELLPVD SEHNAIFQCL PQQVQTSLGR CNLEEHGISS 
ILLTGSGGPF RYTDIAELEK VTPAQAIAHP NWSMGPKISV DSATMMNKGL EYIEAKWLFN 
AAREQLKVII HPQSVIHSMV QYRDGSVLAQ MGEPDMATPI ALTMSYPSRV DAGVKPLDVT 
QVGELTFLQP DFARYPCLKL AIDACYEGQH ATTALNAANE VAVDAFLNNR LGFTDIARIN 
ESVLNKITAS HKSENVNSLE SLIELDRMSR TIALEFLRER S