Gene VIBHAR_03223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03223 
SymbolrnhB 
ID5554153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3249162 
End bp3249800 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content48% 
IMG OID640908704 
Productribonuclease HII 
Protein accessionYP_001446399 
Protein GI156975492 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAA AACCAAAAAC GACCAAAGCA AAAGTAGAAC TACCACCGTT TGAATATCCG 
CAAGGCTATC AGCTAGTTGC GGGTGTTGAT GAGGTAGGGC GTGGTCCTTT GGTGGGTGAT 
GTTGTTACCG CAGCGGTTAT TTTAGATCCA AATAACCCAA TTGAAGGCTT AAACGATTCG 
AAAAAACTGA GTGAGAAAAA ACGCCTTGCA CTGCTGCCAG AAATCAAAGA GAAAGCATTG 
GCATGGGCGG TAGGCCGTTG TTCTCCTGAA GAGATTGATG AGCTCAACAT CCTGCAAGCG 
ACCATGGTTG CCATGCAACG TGCGATTGCG GGTTTGAAAG TACAGCCAGA CCTTGCGCTT 
ATCGATGGTA ATCGTTGTCC TGAACTGCCA ATGGATTCCC AAGCCGTAGT GAAAGGCGAC 
TTGCGCGTGG CGGAAATTAG CGCGGCGTCA ATCATTGCTA AAGTGGTTCG TGACCAAGAA 
ATGGAAGAGT TGGATAAACA ATACCCACAG TTTGGCTTTG CTAAGCACAA AGGTTACCCA 
ACCAAAGCGC ACTTCGAAGC GATTGAGCAA CACGGTGTGA TCAGTGAACA CCGTAAGAGC 
TTCAAGCCCG TGAAGAAAGC GCTCGGCATC GAAGAATAA
 
Protein sequence
MAVKPKTTKA KVELPPFEYP QGYQLVAGVD EVGRGPLVGD VVTAAVILDP NNPIEGLNDS 
KKLSEKKRLA LLPEIKEKAL AWAVGRCSPE EIDELNILQA TMVAMQRAIA GLKVQPDLAL 
IDGNRCPELP MDSQAVVKGD LRVAEISAAS IIAKVVRDQE MEELDKQYPQ FGFAKHKGYP 
TKAHFEAIEQ HGVISEHRKS FKPVKKALGI EE