Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03204 |
Symbol | fadE |
ID | 5555283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3230448 |
End bp | 3232892 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640908685 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001446380 |
Protein GI | 156975473 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCT TGCTCTCAAT CGTAGCGATG ACAGTTGTAT TAGGCATTAC GCTTTACCAC AGAATGTCAC TCGTGAAATC CGTCAGCTTG CTAACTGCTG CCATGCTAGC ACTGACAATC GCAGGCTCAG TTGGTTTTAT TGGCTGGGCT CTTTACGTTC TTGCCGTTGC AGTGTTCGCG GTTTCTGGCA TTCGCCAATC CCTCATTAGC CGCAAAGCAC TGGTGATGTT TAAGAAAGTC CTGCCTGCTA TGTCTCAAAC CGAGAAAGAA GCATTGGACG CAGGTACAGT GTGGTGGGAA GCCGAGCTAT TCAAAGGCAA ACCTGAATGG CAAAAACTTC ACGCAATTAA AGCGCCTAAG CTGAGCAAAG AAGAGCAAGC CTTCCTAGAT GGCCCAGTAA ACGAAGTGTG TGCCATGGTG AGTGATTTCC AAGTAACACA CGAATTGGCC GATTTACCAC CAGAAGTATG GCAATACCTG AAAGACAACA AATTCTTCGC CATGATCATC AAGAAGAAAT ACGGTGGCCT AGAATTCTCA GCGTACGCGC AATCTTTGGT ACTGCAAAAA CTGACTGGTG TTTCTGGCGT ACTGTCGTCA ACCGTTGGTG TACCTAACTC ATTAGGCCCA GGTGAGCTAC TGCAACACTA CGGTACTGAA GAACAAAAAG ATTACTACCT ACCTCGCCTA GCAGAAGGTA AAGAGATCCC ATGTTTCGCA CTGACTAGCC CAGAAGCAGG TTCCGATGCG GGTTCTATCC CAGATTACGG CGTGGTATGT AAAGGCGAAT GGCAAGGTGA AGAAGTCCTT GGTATGCGTC TAACTTGGAA CAAGCGTTAC ATCACTCTAG CACCTGTCGC AACGGTACTT GGTCTTGCAT TCAAACTGCG CGACCCAGAA GGCCTGCTTG GTGATCAAGA AGATCTTGGT ATCACTTGTG CTCTAATCCC AACTGACCTT AAAGGCGTTG AGATTGGTAA CCGTCACTTC CCGCTTAACG TACCATTCCA AAACGGTCCA ACTCGCGGTA AAGACATCTT CGTACCGATG GACTTCATCA TCGGTGGTGA AAAAATGGCA GGCCAAGGCT GGCGTATGCT GGTTGAGTGT CTATCGGTTG GTCGTGGTAT CACGCTACCT TCAAACTCAA CAGGCGGCAT CAAAACAGCG GCTATGGCAA CGGGCGCTTA CTCACGCATT CGTCGTCAGT TCAAACAGCC TATCGGTCAC ATGGAAGGCG TGGAAGAGCC ATTAGCGCGC CTAGGTGGTA ACGCTTACGT GATGGATGCA GCGAGCAACT TAACCGTAGC GGGTATCGAC CTAGGTGAAA AACCTTCAGT TATCTCAGCT ATCGTGAAGT ACCACTGTAC GCACCGTGGT CAACAAAGCA TCATCGACGC GATGGACATT GTAGGTGGTA AAGGTATCTG TATGGGTCCT TCTAACTTCC TAGCGCGTGG TTACCAAGGC GCACCAATCG CGGTAACCGT AGAAGGTGCC AACATTCTAA CTCGTTCAAT GATCATCTTC GGTCAGGGCG CAATTCGTTG TCACCCTTAC GTTCTTGAAG AGATGAACGC AGCATATTCT GACGCTGGCG ATGCGGTTGA GAAGTTCGAC AAAGCGTTAG CGGGTCACGT GAGCTTCACC ATGAGTAACC TAGTGCGCAG TATTTGGTTT GGTCTAAGTG ACGGTCTAGG TTCTTCATCA CCAACCAAAG ACGCGACCAA GCGTTACTAC CAACAATTGA ACCGCTACAG TGCAAACCTT GCTCTGTTAT CGGATATCTC AATGGCGGTA CTGGGTGGTT CGTTGAAACG TAAAGAGCGT TTGTCAGCAC GTCTTGGCGA CATTCTAAGC CAACTATACC TAGGTTCTGC TACGCTAAAA CGCTTTGAGC AAGATGGTCG TCCTGTTGAA GATTTGCCAC TCGTGCATTG GGGCTTGCAA GACAGCTTGA AGCAAACTGA AGCGGCGATT GATGAGTTCC TAGCGAACTT CCCAAACAAA GTGATTGGTC GTGCACTGCG CGTATTGATC ATGCCATTTG GCCGTGTACG TAAAGCGCCA AGCGACAAGC TAGACAGCAA AGTAGCTCGT ATTCTACAAA CGCCAAGTGC AACACGTTCG CGTATTGGTC GTGGTCAGTA CCTAGAACCA ACAGAGCACA ACGCAGCAGG TAAGATTGAG CTTGCATTGT CTGTGATTCT TCAAGCTGAG CCTGTGTTTG ACAAGGTATG TAAAGCGCAA GGTAAACGCC GTCCATTCAT GCGTTTGGAT ATGATTGCTC AAGAAGGTCT AGAGCAAGGC TTCATTACTC AAGAAGAAGC TGATTTGCTG AGAGAAGCAG AGCAACACCG ACTAGACACC ATCAACGTAG ACGATTTTGA GCCAGAGCTA TTGGCCGCAA AGCCGCTGTA CCCTCAGATG GAAAACGTCG CTTAA
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Protein sequence | MDILLSIVAM TVVLGITLYH RMSLVKSVSL LTAAMLALTI AGSVGFIGWA LYVLAVAVFA VSGIRQSLIS RKALVMFKKV LPAMSQTEKE ALDAGTVWWE AELFKGKPEW QKLHAIKAPK LSKEEQAFLD GPVNEVCAMV SDFQVTHELA DLPPEVWQYL KDNKFFAMII KKKYGGLEFS AYAQSLVLQK LTGVSGVLSS TVGVPNSLGP GELLQHYGTE EQKDYYLPRL AEGKEIPCFA LTSPEAGSDA GSIPDYGVVC KGEWQGEEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPE GLLGDQEDLG ITCALIPTDL KGVEIGNRHF PLNVPFQNGP TRGKDIFVPM DFIIGGEKMA GQGWRMLVEC LSVGRGITLP SNSTGGIKTA AMATGAYSRI RRQFKQPIGH MEGVEEPLAR LGGNAYVMDA ASNLTVAGID LGEKPSVISA IVKYHCTHRG QQSIIDAMDI VGGKGICMGP SNFLARGYQG APIAVTVEGA NILTRSMIIF GQGAIRCHPY VLEEMNAAYS DAGDAVEKFD KALAGHVSFT MSNLVRSIWF GLSDGLGSSS PTKDATKRYY QQLNRYSANL ALLSDISMAV LGGSLKRKER LSARLGDILS QLYLGSATLK RFEQDGRPVE DLPLVHWGLQ DSLKQTEAAI DEFLANFPNK VIGRALRVLI MPFGRVRKAP SDKLDSKVAR ILQTPSATRS RIGRGQYLEP TEHNAAGKIE LALSVILQAE PVFDKVCKAQ GKRRPFMRLD MIAQEGLEQG FITQEEADLL REAEQHRLDT INVDDFEPEL LAAKPLYPQM ENVA
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