Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_03193 |
Symbol | |
ID | 5553178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 3219645 |
End bp | 3221099 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640908674 |
Product | protease |
Protein accession | YP_001446369 |
Protein GI | 156975462 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAC GCACTCGCTC GCTAGTTTGT TTATGCCTTG CTGCTGCATT GAGTACACCT GCGCCGATTT ACGCCAATAG TCTCGACCTC CCTGATATTG GTACGGCAGC TGGGGGCACG CTAACAATCG ATCAAGAGTT GATTTACGGC GACGCCTACA TGCGTATGCT TCGATCAAGC AGCCCTATTG TTAGCGACCC TGTCATCAAT GAATACATTG ACACCCTCGG CCACCGTTTG GTCGCGAATG CGAATGACGT AAAAACTCCG TTTCATTTTT TCATGATTCG AGATCGCAAC ATCAACGCAT TCGCCTTCTT TGGTGGTTAT GTTGCTCTGC ACTCGGGTCT GTTTTTACAT GCTCGTACCG AAAGTGAACT GGCCTCTGTT GTCGCGCACG AAATCGCGCA CGTCACACAG CGCCACCTCG CACGAAGCAT GGAAGAGCAA GCACGTCGTT CTCCGGCAAC GATGGCCGCA TTGGCTGGCG CGCTGTTACT CGCCATTGCC TCCCCAGAAG CAGGCATGGC AGCCGTAACG GCAGCAACCG CAGGCAACAT GCAAAGCCAA ATCAACTACA CCCGCTCAAA CGAAAAAGAA GCCGACCGTT TTGGTATCGC GACACTGGCA AAAGCAGGCT TTGACGCACA AGCAATGCCA CGTTTTTTTG GTCGCCTCGC GGATGAATAT CGTTACGCCA GTAAGCCACC ACCAATACTG CTGACTCACC CATTACCAGA AGACCGTATT ACCGATAGCC GAGCACGTGC CCGAGCTTAC CCGCCAATGC GCATCATGCC TTCGATTGAC TACCATTTGA CGCGAGCTCG TATCGTTGCG CGTTACGCAG GTATCGATGG ACCAGCTGCG ATGGGATGGT TTAAACGTAC TCAGAAAAAA GCCTCACCAG AAATCATGCC ATCGTTTGAT TACGGACGTG CGCTGGTTCA CTTAGATAAC AAACGCCTGA GCGAAGCAGA ACCACTGCTG AAAAAGCTAC TACAACAAGA CCCTGGCAAC CCGTTTTATT TAGATGCAAT GACAGATTTG TACATTGCGC AGAAAAAGCC ACAAAAAGCG GTCGATATGC TGAGCAGCGC GCTAAAACGT AATCCGCAAA ACAACGTCTT AACCATCAAC TATGCCAACG CATTACTTGA GGCGAAGAAA GACGAAGAAG CAGTACGTAT TCTGCAGCGC TACACTCACG ATAACCCAGA AGACACCAAT GGTTGGCACC TGCTTTCAAA AGGCAACCAC GCTCTGGGCA ACAATGATGA AGAACTCGCC GCACGTGCCG AAATTTTGGC ATTGCGAGCA AACTGGAACA AAGCGATCCA GTATTATAGT GAGGCAAGTA AAATTGCTGA GTTGGGCAGC TTGAAACAAG CTCGATATGA TGCTCGTATC GACCAACTGA TGATCCAAAG AGATCGATTC ATGGCATTAC AATAA
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Protein sequence | MLKRTRSLVC LCLAAALSTP APIYANSLDL PDIGTAAGGT LTIDQELIYG DAYMRMLRSS SPIVSDPVIN EYIDTLGHRL VANANDVKTP FHFFMIRDRN INAFAFFGGY VALHSGLFLH ARTESELASV VAHEIAHVTQ RHLARSMEEQ ARRSPATMAA LAGALLLAIA SPEAGMAAVT AATAGNMQSQ INYTRSNEKE ADRFGIATLA KAGFDAQAMP RFFGRLADEY RYASKPPPIL LTHPLPEDRI TDSRARARAY PPMRIMPSID YHLTRARIVA RYAGIDGPAA MGWFKRTQKK ASPEIMPSFD YGRALVHLDN KRLSEAEPLL KKLLQQDPGN PFYLDAMTDL YIAQKKPQKA VDMLSSALKR NPQNNVLTIN YANALLEAKK DEEAVRILQR YTHDNPEDTN GWHLLSKGNH ALGNNDEELA ARAEILALRA NWNKAIQYYS EASKIAELGS LKQARYDARI DQLMIQRDRF MALQ
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