Gene VIBHAR_03174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03174 
Symbol 
ID5553119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3204864 
End bp3205997 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content48% 
IMG OID640908655 
Productflagellin 
Protein accessionYP_001446350 
Protein GI156975443 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGATCA CCGTTAATAC CAATGTGGCA GCACTTGTCG CACAGCGTCA TTTGACCAGT 
GCAACCGATA TGCTGAACCA ATCCATGGAG CGTTTGTCTT CAGGGAAGCG TATTAACAGC
GCAAAGGATG ATGCTGCGGG TCTGCAAATC TCTAACCGTC TACAATCGCA AATGCGTGGT
TTGGATGTTG CCGTGCGTAA CGCAAACGAC GGCATTTCCA TCATGCAAAC TGCGGAAGGT
GCGATGAATG AGGTGACTAA CATCATGCAG CGTATGCGTG ATTTGTCGCT CCAGTCAGCT
AATGGCTCAA ACAGCAAAGC GGAACGCACT GCACTGCAAG AAGAAGTGAC GGCACTGAAC
GATGAGCTAA ACCGCATTGC CGAAACCACC TCCTTTGGTG GGCGTAAACT GCTCAATGGC
AGCTTTGGTA AGTCGGCATT TCAAATCGGT GCAGCGTCAG GTGAAGCCGT GCAAGTTGAA
TTAAAGTCGA TGCGCAGTGA TGGCATTGAT ATGGGCGGCT TTAGTTACGT TGCAAACGGA
CGTGCAAACT CTGATTGGCA AGTAAAAGAC GGTGCGAATG ATCTTAGCAT GTCATTTACT
AATCGTTTTG GTGAGACGGA AACCATTCAA ATCAATGCTA AAGCTGGCGA CGATATCGAA
GAGCTTACGA CTTATATTAA TGGTCAGACT GACAAAGTCA CGGCCTCTGT GGATGAAGAA
GGGCAGTTAC AGCTATTTAT GGCTGGAGAA GAGACTTCAG GCACTTTATC GTTTTCAGGT
GATTTAGCGA GTGAACTTGG GCTGCAGCTA AAAGGGTACG ATGCGGTTGA TAATATCGAT
ATTACGTCTG TCGGTGGTGC GCAACAAGCT GTGGCTGTCC TTGATACAGC GATGAAGTAC
GTTGATAGCC ATCGAGCAGA ACTAGGCGCG TACCAAAACC GCTTTAACCA CGCGATCAAT
AATCTGGATA ACATCCATGA AAACCTAGCG GCTTCGAACA GCCGTATCCA AGATACTGAC
TACGCCAAAG AAACCACGCA AATGGTGAAG CAGCAGATCT TACAACAGGT CAGTACTTCT
ATTCTGGCAC AAGCAAAACA AGCGCCAAAC CTTGCTTTGA CGCTGCTTGG TTAA
 
Protein sequence
MAITVNTNVA ALVAQRHLTS ATDMLNQSME RLSSGKRINS AKDDAAGLQI SNRLQSQMRG 
LDVAVRNAND GISIMQTAEG AMNEVTNIMQ RMRDLSLQSA NGSNSKAERT ALQEEVTALN
DELNRIAETT SFGGRKLLNG SFGKSAFQIG AASGEAVQVE LKSMRSDGID MGGFSYVANG
RANSDWQVKD GANDLSMSFT NRFGETETIQ INAKAGDDIE ELTTYINGQT DKVTASVDEE
GQLQLFMAGE ETSGTLSFSG DLASELGLQL KGYDAVDNID ITSVGGAQQA VAVLDTAMKY
VDSHRAELGA YQNRFNHAIN NLDNIHENLA ASNSRIQDTD YAKETTQMVK QQILQQVSTS
ILAQAKQAPN LALTLLG