Gene VIBHAR_03173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03173 
Symbol 
ID5554124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3203467 
End bp3204600 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content47% 
IMG OID640908654 
Productflagellin 
Protein accessionYP_001446349 
Protein GI156975442 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA ATGTAAACAC AAACGTATCA GCGATGACCG CTCAGCGTTA CCTAAACAAC 
GCAAACTCAG CACAACAAAC TTCTATGGAG CGTTTGTCTT CAGGTTTCAA AATCAACAGC
GCGAAAGATG ACGCTGCGGG TCTTCAAATC TCGAACCGCT TGAACGTACA AAGCCGTGGC
CTAGATGTGG CTGTTCGTAA CGCGAACGAC GGTATCTCTA TTGCACAAAC TGCTGAAGGT
GCAATGAACG AGACCACTAA CATCCTACAA CGTATGCGTG ACCTGTCTCT TCAATCAGCA
AACGGTTCTA ACTCAAAAGC AGAACGTGTT GCGATTCAAG AAGAAGTAAC AGCGCTGAAC
GACGAACTAA ACCGTATCGC TGAGACGACC TCTTTCGGTG GCAACAAACT TCTAAACGGT
ACTTACGGTA CTCAGTCTTT CCAAATCGGT GCGGACAACG GTGAAGCAGT AATGCTTAAC
CTAAAAGACA TGCGCTCTGA CAACCAAATG ATGGGCGGCG TGAGCTACCA AGCTGACAAC
GGTAAAGACA AAAACTGGAA CGTTGAAGCG GGCAAAAACG ACCTGAAAAT CAGCCTGACT
GACAGCTTTG GTCAAGAGCA AGAAATCAAC ATCAGCGCGA AAGCGGGTGA CGATATCGAA
GAGCTGGCGA CGTACATCAA TGGTCAAACT GACCTAGTAA AAGCGTCAGT AGACCAAGAC
GGTAAACTGC AAGTTTTCGC TGGTAACAAC AAAGTAGAAG GCGACGTTGA ATTCTCTGGC
GGCCTATCTG GTGAGCTAGG TCTAAACGAC GGTAAGAAAG TAACGGTTGA TACTATCGAT
GTAACATCAG TAGGTGGCGC ACAAGAATCT GTGGCTATCA TTGATGCGGC TTTGAAATAC
GTAGACAGCC ACCGTGCAGA GCTAGGCGCT TTCCAAAACC GTTTCAACCA CGCAATCAGC
AACTTGGATA ACATCAACGA GAACGTGAAC GCGTCGAAGA GCCGTATCAA AGATACAGAC
TTCGCGAAGG AAACGACTCA AATGACCAAG TCACAAATTC TATCGCAAGC GTCAAGCTCA
ATCCTTGCGC AAGCGAAACA AGCGCCAAAC TCAGCGCTAA GTCTTCTAGG TTAA
 
Protein sequence
MAVNVNTNVS AMTAQRYLNN ANSAQQTSME RLSSGFKINS AKDDAAGLQI SNRLNVQSRG 
LDVAVRNAND GISIAQTAEG AMNETTNILQ RMRDLSLQSA NGSNSKAERV AIQEEVTALN
DELNRIAETT SFGGNKLLNG TYGTQSFQIG ADNGEAVMLN LKDMRSDNQM MGGVSYQADN
GKDKNWNVEA GKNDLKISLT DSFGQEQEIN ISAKAGDDIE ELATYINGQT DLVKASVDQD
GKLQVFAGNN KVEGDVEFSG GLSGELGLND GKKVTVDTID VTSVGGAQES VAIIDAALKY
VDSHRAELGA FQNRFNHAIS NLDNINENVN ASKSRIKDTD FAKETTQMTK SQILSQASSS
ILAQAKQAPN SALSLLG