| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03144 |
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| Symbol | fliA |
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| ID | 5554199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3173214 |
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| End bp | 3173948 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640908625 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001446320 |
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| Protein GI | 156975413 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAAG CGATTACCTA TGACCAACAT GGCAAATTTA ACAGCCAGCA GGCGTTCATT
GAACGTTACT CGGTGTTGGT TAAGCGCATT GCTCATCATC TGTTAGGCCG TTTACCGCCG
AGTGTTCAGG TAGAAGATTT AATTCAGGCC GGCATGATTG GCCTTATCGA AGCTCAGCAG
AATTATGATG GTTCTAAAGG TGCGAGCTTT GAAACTTATG CAGGTATCCG AATTCGCGGT
GCAATGTTAG ATGACATTCG CAAAGGCGAC TGGGTGCCTC GTTCTGTTCA TAAGAATAAT
CGCGAAATTA ATCAAGCGAT CGCAGAGCTG GAAGGTGTAC TAAATCGTGA CCCATCGGAC
TCAGAAGTAG CAGCACATCT TGGTATGACA CTAGACCAAT ATCATAGTGC ACTTACCGAC
ATAAACTGTT CAAAACTGGT GGGGATTGAA GATTTAGGCG TCTCTGATGA TGTGATTTCA
CCGGCTGATG AAACTGATGA CAGCAACCCA TTTAAGGGCG TTGCTGATGA ATCGTTCAAA
AAAGCACTGG TTGAATCAAT AAAACAACTT CCAGAGCGTG AAGCGCTAGT ACTTTCGCTT
TATTATGACG AAGAACTCAA TTTGAAAGAG ATTGGCGACG TGTTGGGTGT AAGCGAATCT
CGCGTAAGCC AAATACTGAG TCAAGCGATG CAACGTTTAC GCACCAAGCT CAGTGCGTGG
ACACAAAATG ACTAA
|
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| Protein sequence | MNKAITYDQH GKFNSQQAFI ERYSVLVKRI AHHLLGRLPP SVQVEDLIQA GMIGLIEAQQ
NYDGSKGASF ETYAGIRIRG AMLDDIRKGD WVPRSVHKNN REINQAIAEL EGVLNRDPSD
SEVAAHLGMT LDQYHSALTD INCSKLVGIE DLGVSDDVIS PADETDDSNP FKGVADESFK
KALVESIKQL PEREALVLSL YYDEELNLKE IGDVLGVSES RVSQILSQAM QRLRTKLSAW
TQND
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