| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03120 |
|---|
| Symbol | fadJ |
|---|
| ID | 5553806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3148708 |
|---|
| End bp | 3150822 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908601 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_001446296 |
|---|
| Protein GI | 156975389 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AAAAAGCATT TAGTCTAAAG ATTGATGAGC AGAACATTGC TTGGCTAGCC
ATCGATGTGC CAAATGAGAA AATGAACACG CTGCAAGCGG CATTTGCAGA TGAGATGAAA
GAAATTTTCG CTCAACTGAA AGACACCAGC GGCGTGAAAG GGATGGTCAT TCATTCCCTA
AAACCAGATA ACTTTGTTGC GGGCGCCGAC GTTCGTATGC TTGAAGCGTG CACAACGGCG
AGTGAAGCGG AAGCATTGGC TAAGCAAGGT CAAGAGTTAT TCCAGCAGCT ATCTGATCTG
CCTTACCCAG TTGTTGCTGC GATTCACGGC CCATGTCTAG GTGGTGGTTT AGAGCTTGCG
CTAGCGTGTG ATTACCGCGT ATGTACTGAT TCCGATAAAA CGCGTCTTGG TTTGCCTGAA
GTGCAACTTG GTTTGTTGCC TGGTTCTGGT GGTACTCAAC GTCTTCCGCG TTTGATTGGT
CTATTACCTT CGCTGGATTT AATCCTTACA GGCAAACAAC TGCGTGCAAA GAAAGCGAAA
AAGTTGGGTG TGGTTGACGC ATGTGTGCCA GAGACTGTCT TACTCGATAT CGCGAAGATG
CATGTCGAAA AAGGCAAGAA GAAAGGTAAA CAAAAGCAAT CGACAAAAGA GAAGTTGATG
TCGGGTAGTG GTTTAGGTCG TAAGTTTGTG TTTGAGCAAG CCGCGAAGAA AACCAATGAA
AAGACCCGTG GTAACTACCC TGCAACGGTC GCGATTCTAG AAGTGATCCA GCATGGTCTT
GAAAAGGGCT TTGCCCAAGG TCAAGAACTT GAAGCGAAGC GCTTTGGCGA ATTGGTGATG
AGTTCAGAAT CTAAAGCACT GCGTTCTATT TTCTTTGCTA CTACAGAAAT GAAGAAAGAA
AACGGCGCAG AAGCTGAGCC AACTGCAGTC AACAAAGTTG GCGTGTTAGG TGGCGGTCTA
ATGGGGGCTG GCATTAGCCA TGTTTCTGTT GCGAAAGCGA AAGTGCCAGT ACGTATTAAA
GATGTCAGCA ATGATGGTGT GCTTAACGCG TTAAACTACA ACTACAAGTT GTTCGAAAAG
CAGCGTAAGC GCCGCATTAT CTCGAAAGCG GGTCTGCAAT CTAAAATGCT GCAACTTTCG
GGTGGTATTG ATTTTACAAG CTTCAATCAT ATTGATGTGG TTATCGAAGC TGTATTTGAA
GATCTTGACC TTAAACAGGC GATGGTTGCA GATATTGAAG CGAACGCGAA ACCAGAGACT
ATCTTTGCGA CCAACACGTC TTCGTTACCA ATTCACAAAA TTGCAGAAAA AGCAGAGCGT
CCAGAAAACA TCGTCGGTCT GCATTACTTC AGCCCAGTAG AGAAAATGCC ACTGGTGGAA
GTGATTCCTC ATGAAACTAC GTCAGAAGAG ACCATTTCTA CCGTTGTTGC ACTAGCGAAG
AAGCAGGGCA AGACACCAAT CGTAGTGAAA GATAAAGCGG GCTTCTATGT AAACCGCATT
CTTGCGCCTT ACATGAACGA AGCTGCGCAC ATCTTGCTGG CAAATGAGCC AATCGAACAA
CTTGATGGAG CGCTGCTTGA CTTCGGTTTC CCAGTAGGTC CTATCACCTT GTTGGATGAA
GTCGGTGTGG ATATCGGTGC TAAAATCATG CCGATCTTGG TTAACGAATT GGGCGAGCGA
TTCAAAGGTC CAGACGTATT CGATACACTA CTGAACGATG GCCGCAAAGG TCGTAAGACT
GGTAAAGGCT TCTATACCTA CAAAGGTAAG AAGAAAGAAG TCGATAAGTC AGTTTACAAG
CTATTGAACC TGACGCCAGA ATCCAAGCTA AGCGACAATG ACATTGCACT ACGTTGTGTG
CTACCAATGC TAAACGAGGC GGTTCGCTGT TTAGATGACG GTATTATCCG TTCTCCACGC
GATGGTGATA TCGGTGCGAT CTTTGGTATA GGCTTCCCAC CATTCTTAGG TGGTCCATTC
TGTTACATGG ATCAATTCGG TTTGAAAGAA CTGGTTGAGA AAATGAACGA GTTTGCATCG
AAATACGGTG ATCGTTACGC GCCGTGTGAT GGATTACTCA CTCGTGCGGG TGAAGGTCGT
AACTTCTACG ATTAA
|
|---|
| Protein sequence | MSEQKAFSLK IDEQNIAWLA IDVPNEKMNT LQAAFADEMK EIFAQLKDTS GVKGMVIHSL
KPDNFVAGAD VRMLEACTTA SEAEALAKQG QELFQQLSDL PYPVVAAIHG PCLGGGLELA
LACDYRVCTD SDKTRLGLPE VQLGLLPGSG GTQRLPRLIG LLPSLDLILT GKQLRAKKAK
KLGVVDACVP ETVLLDIAKM HVEKGKKKGK QKQSTKEKLM SGSGLGRKFV FEQAAKKTNE
KTRGNYPATV AILEVIQHGL EKGFAQGQEL EAKRFGELVM SSESKALRSI FFATTEMKKE
NGAEAEPTAV NKVGVLGGGL MGAGISHVSV AKAKVPVRIK DVSNDGVLNA LNYNYKLFEK
QRKRRIISKA GLQSKMLQLS GGIDFTSFNH IDVVIEAVFE DLDLKQAMVA DIEANAKPET
IFATNTSSLP IHKIAEKAER PENIVGLHYF SPVEKMPLVE VIPHETTSEE TISTVVALAK
KQGKTPIVVK DKAGFYVNRI LAPYMNEAAH ILLANEPIEQ LDGALLDFGF PVGPITLLDE
VGVDIGAKIM PILVNELGER FKGPDVFDTL LNDGRKGRKT GKGFYTYKGK KKEVDKSVYK
LLNLTPESKL SDNDIALRCV LPMLNEAVRC LDDGIIRSPR DGDIGAIFGI GFPPFLGGPF
CYMDQFGLKE LVEKMNEFAS KYGDRYAPCD GLLTRAGEGR NFYD
|
|---|
| |