Gene VIBHAR_03103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03103 
Symbol 
ID5553734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3128574 
End bp3129587 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content48% 
IMG OID640908584 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001446279 
Protein GI156975372 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC AATACAATGT TGCCGTATTA GGTGCGACCG GTGCGGTCGG TGAAACAATT 
TTGGAAGTGC TTCAAGAGCG CAAATTCCCA GTAGGCGAAA TCTTCCTGTT GGCAAGTGAA 
CGCAGTGAAG GTAAGACTTA CCGCTTCAAT GGTAAAACAA TTCGCGTACA AAACGTGGAA 
GAGTTTGATT GGTCACAAGC ACACATCGCT CTGTTCTCTG CTGGTGGTGA ACTGTCAGCA 
AAATGGGCAC CAATCGCAGC AGACGAAGGC GTTATCGTTA TCGACAATAC GTCACACTTC 
CGTTACGAGT ACGACATTCC TCTTGTTGTG CCAGAAGTAA ACCCAGAAGC GATTGCAGAG 
TTCCGTAACC GTAACATCAT TGCGAACCCG AACTGTTCAA CCATCCAAAT GCTGGTGGCA 
CTAAAGCCTA TTCACGATGC AGTGGGTATT GAGCGTATTA ACGTGTCAAC GTACCAATCG 
GTTTCTGGCG CGGGTAAGGC GGGTATTGAT GAGCTAGCAG GTCAAACAGC GAAGCTGCTA 
AACGGCCTAC CAGCTGACAA GAAGCAATTC TCTCAGCAGA TCGCCTTTAA CTGTATTCCA 
CAAATCGACC AGATGATGGA AAACGGCTAC ACCAAAGAAG AAATGAAAAT GGTGTGGGAG 
ACGCAAAAAA TCTTCAACGA TTCATCGATC ACAGTAAACC CAACGTGCGT TCGTGTACCA 
GTGTTCTACG GTCATGCAGA AGCGCTTCAG ATTGAAACGC GTTCACCGAT CGATGCACAA 
GAAGTGGTTA ACCTACTTGA GCAAACTGAC GGTATCGAAG TATTCCACGG TGAAGACTTC 
CCAACACAAG TTCGCGATGC GGGCGGTAAA GACCATGTAA TGGTAGGTCG TATTCGTAAC 
GATATCAGCC ATCACAGCGG CGTAAACCTA TGGGTTGTTG CAGATAACGT ACGCAAAGGC 
GCAGCAACTA ACGCGGTTCA AATCGCAGAA GTTCTGATCC GCGACTACTA CTAA
 
Protein sequence
MSQQYNVAVL GATGAVGETI LEVLQERKFP VGEIFLLASE RSEGKTYRFN GKTIRVQNVE 
EFDWSQAHIA LFSAGGELSA KWAPIAADEG VIVIDNTSHF RYEYDIPLVV PEVNPEAIAE 
FRNRNIIANP NCSTIQMLVA LKPIHDAVGI ERINVSTYQS VSGAGKAGID ELAGQTAKLL 
NGLPADKKQF SQQIAFNCIP QIDQMMENGY TKEEMKMVWE TQKIFNDSSI TVNPTCVRVP 
VFYGHAEALQ IETRSPIDAQ EVVNLLEQTD GIEVFHGEDF PTQVRDAGGK DHVMVGRIRN 
DISHHSGVNL WVVADNVRKG AATNAVQIAE VLIRDYY