Gene VIBHAR_03080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03080 
Symbol 
ID5554298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3104452 
End bp3105108 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID640908562 
Producthypothetical protein 
Protein accessionYP_001446257 
Protein GI156975350 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCTTA AGAAACTCAC CAAAAGTGAT TTAGATATTT TGAATTCAAT GAAGAACGTC 
GTCGATGGCA TTGCCCGTAT GTATGGTGAG CATACTGAAG TCGTTCTTCA CAGTCTTGAT 
GCAGAAGCAC CGGAAATCAT CAAAATTGCC AATGGCCACA TCACTGAACG TGGAGAAGGC 
GCGCCAATTA CCAACTTAGC AAGGATGAAG CTACTTGAGG GCAAGGACGT TTCAGACTCG 
TATCTGACTA AAACGGCGAG CGGAAAGACC TTGCACTCGA TCACTACTAT CGTCCGCAAT 
CCAAAAAACA AGCCGATTGG CCTACTCTGT ATTAACGTGG ATATGGATGT GCCAATGCAA 
GACTTCTTGC GTTCCATCAT GCCACCGCAG CAGAACCCGT GTTGTACTGG GTCACAATCC 
CCAGAAACGT TTGCTCGCAA TATTGACGAG ACCATCATTA GTACGATTGA AACGGTTCAA 
TCAGAAGTGT GGTCGAACGA AGCAATTAGC CCTTCCAAAC GCAACCGAGA GTTAGTGACA 
CGCTTACAAG GTTTGGGGAT TTTCAAATAC AAAGATGCGG TATTAATGGT GGCAAACCAC 
CTAGGTATCT CGCGCGATAC GATCTACCTC TACCTAAGAG AACTGGGTAA CGATTAA
 
Protein sequence
MQLKKLTKSD LDILNSMKNV VDGIARMYGE HTEVVLHSLD AEAPEIIKIA NGHITERGEG 
APITNLARMK LLEGKDVSDS YLTKTASGKT LHSITTIVRN PKNKPIGLLC INVDMDVPMQ 
DFLRSIMPPQ QNPCCTGSQS PETFARNIDE TIISTIETVQ SEVWSNEAIS PSKRNRELVT 
RLQGLGIFKY KDAVLMVANH LGISRDTIYL YLRELGND