Gene VIBHAR_03049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03049 
Symbol 
ID5556380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3072587 
End bp3073582 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content45% 
IMG OID640908531 
Productglyceraldehyde 3-phosphate dehydrogenase 
Protein accessionYP_001446226 
Protein GI156975319 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCA AAGTAGGTAT TAACGGTTTT GGCCGTATCG GTCGTTTCGT ATTCCGTGCA 
GCGCAAGAGC GCAACGACAT CGAAGTTGTA GGTATTAACG ACCTTATCGA CGTAGATTAC 
ATGGCATACA TGCTTAAGTA CGACTCAACT CACGGCCGTT TCAACGGTAC TGTTGAAGTT 
GAAGGCGGTA ACCTAATCGT TAACGGCAAA ACTGTACGTG TAACTGCAGA GCGCAACCCA 
GAAGACCTAA AATGGGATGC TATCGACGTT GACGTTGTAG CTGAAGCAAC TGGTCTTTTC 
CTAACTGACG AGACTGCACG TAAGCACATC ACTGCTGGCG CAAAGAAAGT TGTTCTAACT 
GGTCCTTCAA AAGACGCTAC TCCAATGTTC GTAATGGGCG TTAACCACGC TACTTACGCT 
GGTCAAGACA TCGTTTCTAA CGCTTCTTGT ACTACTAACT GTCTAGCGCC TATCGCTAAA 
GTTCTTAACG ACAAGTTCGG TATCGAATCT GGTCTTATGA CTACAGTTCA CGCTACTACA 
GCAACTCAAA AAACTGTAGA CGGTCCTTCT GCTAAAGACT GGCGCGGTGG TCGTGGTGCT 
TCTCAAAACA TCATCCCATC ATCAACTGGT GCTGCTAAAG CTGTAGGCGT TGTTCTTCCA 
GAACTAAACG GCAAACTAAC TGGTATGGCT TTCCGCGTAC CAACAGCTAA CGTTTCTGTA 
GTTGACCTAA CAGTTAACCT AAAAGAAGGC GCATCTTACG AAGCTATCTG TGCAGCAATG 
AAAGAAGCTT CTAAAGGCGA ACTAGCTGGC GTACTAGGCT ACACTGAAGA TCAAGTTGTT 
TCTCAAGACT TCATCGGCGA AGTTCAAACT TCAGTATTCG ATGCTAAAGC TGGTATCGCT 
CTAACTGATA ACTTCGTTAA AGTTGTATCT TGGTACGACA ACGAAATCGG TTACTCAAAC 
AAAGTTCTAG ACCTAATCGC TCACATCTCT AAGTAA
 
Protein sequence
MTIKVGINGF GRIGRFVFRA AQERNDIEVV GINDLIDVDY MAYMLKYDST HGRFNGTVEV 
EGGNLIVNGK TVRVTAERNP EDLKWDAIDV DVVAEATGLF LTDETARKHI TAGAKKVVLT 
GPSKDATPMF VMGVNHATYA GQDIVSNASC TTNCLAPIAK VLNDKFGIES GLMTTVHATT 
ATQKTVDGPS AKDWRGGRGA SQNIIPSSTG AAKAVGVVLP ELNGKLTGMA FRVPTANVSV 
VDLTVNLKEG ASYEAICAAM KEASKGELAG VLGYTEDQVV SQDFIGEVQT SVFDAKAGIA 
LTDNFVKVVS WYDNEIGYSN KVLDLIAHIS K