Gene VIBHAR_03044 details

Gene Information

• Locus tag: VIBHAR_03044
• ID: 5553971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 3067391
• End bp: 3069241
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640908526
• Product: protease
• Protein accession: YP_001446221
• Protein GI: 156975314
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0616] Periplasmic serine proteases (ClpP class)
• TIGRFAM ID: [TIGR00705] signal peptide peptidase SppA, 67K type; [TIGR00706] signal peptide peptidase SppA, 36K type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TCTTCAAATT TATTGGTCTG ATATTTAAGG GGATATGGAA AGCCATCACC 
TTTGTCAGAC TTGCTCTGGC AAACTTGATC TTCCTGGTGA TGATTGCCGT CTTCTACTTT 
GCCTTTACCT ACACTGGCGA AAGTCAGCCA ACCGTGGAAA AAGAATCCGC GCTGGTAATG 
AACCTTTCTG GGCCTATCGT TGAGCAGCGC CGTTACGTAA ACCCGATGGA TTCGATAGCG 
GGCTCTGTCC TCGGTAACGA GATGCCGAAA GAGAACGTAT TGTTCGACAT CGTCGATACC 
ATTCGCTACG CGAAAGACGA TCCTAAGGTA TCTGGCCTAG TTCTGGCTCT GCGCGATATG 
CCTGAGACTA ACCTGACCAA ACTTCGTTAT ATCGCAAAAG CGCTGAATGA ATTTAAAACG 
TCTGGCAAAC CTGTTTATGC AGTCGGCGAT TTCTACAATC AAAGCCAATA TTACCTAGCG 
AGCTATGCAG ATAAAGTCTT CCTCGCTCCA GATGGCGGTG TGTTGATTAA GGGCTACAGC 
TCTTACTCGA TGTACTACAA AACCTTGTTA GAGAAGTTAG ACGTATCGAC GCACGTGTTC 
CGCGTGGGCA CTTACAAGTC TGCGATTGAG CCATTTATTC GTGATGACAT GTCTGATGCG 
GCAAAAGAGT CGGCGACGCG CTGGATCACT CAGCTTTGGA GTGCCTTTGT TGATGACGTA 
GCAACCAACC GTAATATCGA TGCCAAAGCA CTGAATCCAA CCATGGATGA ATTGCTTGCT 
GAGATGAAAT CAGTCGATGG TGACCTTGCG CAACTGGCCG TTAAAATGGG CCTAGTCGAT 
GAGCTAGCGA CACGTCAAGA CGTACGCAAA CTGTTCGCAA AAGAGTTCGG CAGTGACGGT 
AAAGACAGCT ACAACGCAAT TGGCTACTAC GATTACCTAG CGACCATGCG CCCTAACCTA 
GCGCCGTCTG AAAATGACAT TGCTGTTGTC GTAGCAAGCG GCGCCATTAT GGATGGTCAA 
CAACCGCGCG GTACCGTTGG CGGTGATACG GTGGCAAGCC TACTTCGTCA AGCTCGCAAC 
GACGACAAAG TTAAAGCGGT TGTCCTGCGT GTCGACAGCC CAGGAGGCAG CGCTTTTGCC 
TCTGAAGTGA TTCGTAACGA AGTAGAAGCG TTAAAAGAAG CAGGTAAACC AGTTGTGGTT 
TCGATGTCTA GCTTAGCGGC TTCCGGCGGT TACTGGATCT CAATGAGTGC AGATAAGATT 
GTTGCTCAGC CAACCACGCT AACTGGCTCG ATTGGCATCT TCAGTGTTAT CACGACATTT 
GAAAAAGGCT TTACCAAACT TGGTATCAGT ACCGATGGTG TTGGCACATC ACCATTCTCT 
GGTGATGGCA TCACAACGGG TCTTTCAGAT GGTGCATCTC AAGCATTCCA GCTCGGCATC 
GAACATGGCT ACAAGCGCTT TATCTCTCTG GTTGGCTCAA ACCGAGATAT GTCACTAGAC 
GAAGTAGATA AAGTCGCTCA AGGTCGAGTT TGGACAGGTC AAGATGCAAT GTCATTCGGC 
CTTGTAGACC AAATGGGTGA CTTTGATGAC GCAGTGAAAC TGGCAGCTAA ACTGGCTGAT 
GTAGAAAACT ATGAGCTCTA CTGGGTTGAA GAACCATTAT CACCGACAGA ACAGTTCGTC 
CAAGAGTTCA TGAACCAAGT GAAAGTCTCT TTGGGCATCG ATGCGACAAG CTTCTTGCCA 
AAGAGCTTAC AGCCTGTAAC TCAACAGCTT GAGCAAGATG CAAGCATGAT GCAGAGCTTC 
AACGATCCAA AAGGCCAATA CGCCTTCTGT TTGAACTGCC AAGTGCAATA G 

 

Protein sequence

MKKLFKFIGL IFKGIWKAIT FVRLALANLI FLVMIAVFYF AFTYTGESQP TVEKESALVM 
NLSGPIVEQR RYVNPMDSIA GSVLGNEMPK ENVLFDIVDT IRYAKDDPKV SGLVLALRDM 
PETNLTKLRY IAKALNEFKT SGKPVYAVGD FYNQSQYYLA SYADKVFLAP DGGVLIKGYS 
SYSMYYKTLL EKLDVSTHVF RVGTYKSAIE PFIRDDMSDA AKESATRWIT QLWSAFVDDV 
ATNRNIDAKA LNPTMDELLA EMKSVDGDLA QLAVKMGLVD ELATRQDVRK LFAKEFGSDG 
KDSYNAIGYY DYLATMRPNL APSENDIAVV VASGAIMDGQ QPRGTVGGDT VASLLRQARN 
DDKVKAVVLR VDSPGGSAFA SEVIRNEVEA LKEAGKPVVV SMSSLAASGG YWISMSADKI 
VAQPTTLTGS IGIFSVITTF EKGFTKLGIS TDGVGTSPFS GDGITTGLSD GASQAFQLGI 
EHGYKRFISL VGSNRDMSLD EVDKVAQGRV WTGQDAMSFG LVDQMGDFDD AVKLAAKLAD 
VENYELYWVE EPLSPTEQFV QEFMNQVKVS LGIDATSFLP KSLQPVTQQL EQDASMMQSF 
NDPKGQYAFC LNCQVQ