Gene VIBHAR_03037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03037 
Symbol 
ID5554324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3059882 
End bp3060463 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content46% 
IMG OID640908519 
Producthypothetical protein 
Protein accessionYP_001446214 
Protein GI156975307 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAA CAGTCTTTAT TACTGGTGCA AACCGTGGGA TCGGCTTAAG TTTAACTGAA 
CTGTATTTGC AACAAGGCGA TCAAGTACAT GCGACTAGCC GTAACCTTGC AGAAAGCAAA 
GAGCTTCAAG CATTAGCGTC GACCCATGCC ACACTGACGT TACACGAATT AGATGTGACA 
AATTACCCGC AAGTTGCCAA ACTAGCAAAA GAACTCCCAG CCATCGATCT TCTGATCAAC 
AATGCAGGCT ACTACGGGCC TAAAGGCTAT GGCTTTAGTA ATACAGATGT TGAGGAATGG 
CGAAAGGTCT TCGAGATAAA CACCATCGCA CCACTAAAGT TGGTTGAGGC TTTTTATCCG 
CTTTTACAAG CAGGTAGCAC GAAGAAGATT GCCTGTATCT CATCTAAAGT CGGCAGCATG 
ACAGAAAACA CCTCCGGCGG TGGTTATATC TATCGTTCTT CTAAAGCGGC GCTCAACTCT 
GTTGTGAAAA GCTTATCTAA TGACTTAACA AGTGAAGGTT TCTCCGTGCT TGCGCTACAC 
CCGGGTTGGG TACGCACTGC AATGGGAGGG CCTAACGCCT GA
 
Protein sequence
MSQTVFITGA NRGIGLSLTE LYLQQGDQVH ATSRNLAESK ELQALASTHA TLTLHELDVT 
NYPQVAKLAK ELPAIDLLIN NAGYYGPKGY GFSNTDVEEW RKVFEINTIA PLKLVEAFYP 
LLQAGSTKKI ACISSKVGSM TENTSGGGYI YRSSKAALNS VVKSLSNDLT SEGFSVLALH 
PGWVRTAMGG PNA