Gene VIBHAR_02991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02991 
Symbol 
ID5552956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3015104 
End bp3015748 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID640908474 
Productribonuclease T 
Protein accessionYP_001446170 
Protein GI156975262 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAG AAAATGAAGC TCTGACCCTG AAAAAGCGTT TTCGTGGTTA TTTTCCAGTG 
GTAGTAGACG TTGAGACCGC AGGTTTCAAT GCTCAAACTG ATGCACTTTT AGAAATCTGT 
GCCGTCACCC TTAGCATGGA TGAAAATGGC GATCTGCATC CTGCCTCAAC CATTCATTTT 
CATATCGAAC CTTTTGAAGG CGCGAATTTA GAAAAAGAAG CGCTTGAATT CAATGGCATT 
CGTGACCCAT TCAGCCCTCT TCGTGGTGCA GTATCAGAAC AAGAAGCACT CAAAGAAATC 
TACAAACTGA TCCGCAAAGA GCAAAAAGCG GCAGACTGTT CCCGTGCCAT CATGGTGGCA 
CATAACGCTG CTTTCGACTT AAGTTTTGTT AATGCAGCAA ATGAGCGCTG CAAACTCAAA 
AGAGTCCCTT TCCATCCATT TGCCACTTTT GATACCGCAA CATTAAGTGG GCTTGCTTAT 
GGTCAAACTG TTCTCGCTAA AGCATGTAAA GCTGCAGGGA TGGAATTCGA CAATCGTGAA 
GCGCATTCTG CCCTTTACGA TACACAACAA ACTGCAGAAT TATTCTGTGG CATCGTCAAC 
AAATGGAAGG CCCTAGGCGG TTGGCCGCTT GTCGACGAAG AATAA
 
Protein sequence
MTIENEALTL KKRFRGYFPV VVDVETAGFN AQTDALLEIC AVTLSMDENG DLHPASTIHF 
HIEPFEGANL EKEALEFNGI RDPFSPLRGA VSEQEALKEI YKLIRKEQKA ADCSRAIMVA 
HNAAFDLSFV NAANERCKLK RVPFHPFATF DTATLSGLAY GQTVLAKACK AAGMEFDNRE 
AHSALYDTQQ TAELFCGIVN KWKALGGWPL VDEE