Gene VIBHAR_02947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02947 
Symbol 
ID5556007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2971087 
End bp2971995 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID640908429 
Producthypothetical protein 
Protein accessionYP_001446127 
Protein GI156975220 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATGT TAACGAAAAA AGAGAATCTT GAAGCGGTCG AGAAATTTGC AGAGAACCTG 
GAAGTTGAAG GCCGTAGTTT ATGGCAAGAC GCACGCATCC GCTTTATGCG TAACAAAGCG 
GCAATGGTGA GCTTGTTCAT TCTTACATTG ATGACCCTTG CGGTAATCTT CCTGCCAATG 
TTGGCACCTT ACACATTTGA TGATACAGAC TGGTACGCAA TGCACGTCGG TCCAAGTGCT 
GAACACTGGT TCGGTACTGA CAGCTTAGGT CGTGACCTTT ATGTACGTAC GCTGATTGGC 
GGTCGTATCT CTCTAATGGT TGGTGTTCTA GGTGCATTGG TTGCGGTTGT GATTGGTACG 
CTTTACGGTG CGGCTTCTGG CTTCATCGGC GGTAAAGTTG ACCGTATCAT GATGCGTATT 
CTTGAAATCC TATACGCCGT TCCGTTCATG TTCCTAGTTA TCGTACTGGT AACATTCTTC 
GGCCGTAACA TCGTTCTTAT CTTTGTCGCT ATCGGCGCTA TTGCATGGCT AGATATGGCT 
CGTATCGTAC GTGGTCAAAC GCTAAGTCTA CGTAGTAAAG AGTTTATTGA AGCGGCACAC 
GTTTGTGGTG TGAGCAAGTG GAAGATCATC ACTCGCCACA TCGTTCCAAA CGTACTGGGC 
ATCGTAGCGG TTTACTCAAC TCTACTTATC CCAAGCATGA TTCTGACCGA ATCATTCCTT 
TCATTCCTTG GTCTTGGTGT ACAGGAACCA ATGACAAGTT GGGGCGCACT TCTACAAGAA 
GGTTCGCAAA CAATGGAAGT GGCAATCTGG CAGCTGGCGT TCCCAGCAGC ATTCATGGTT 
GTGACTCTAT TCTGCTTCAA CTACGTTGGT GACGGTCTGC GCGATGCGCT GGATCCAAAA 
GACAGATAA
 
Protein sequence
MVMLTKKENL EAVEKFAENL EVEGRSLWQD ARIRFMRNKA AMVSLFILTL MTLAVIFLPM 
LAPYTFDDTD WYAMHVGPSA EHWFGTDSLG RDLYVRTLIG GRISLMVGVL GALVAVVIGT 
LYGAASGFIG GKVDRIMMRI LEILYAVPFM FLVIVLVTFF GRNIVLIFVA IGAIAWLDMA 
RIVRGQTLSL RSKEFIEAAH VCGVSKWKII TRHIVPNVLG IVAVYSTLLI PSMILTESFL 
SFLGLGVQEP MTSWGALLQE GSQTMEVAIW QLAFPAAFMV VTLFCFNYVG DGLRDALDPK 
DR