Gene VIBHAR_02939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02939 
Symbol 
ID5555009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2961255 
End bp2962208 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID640908421 
Producthypothetical protein 
Protein accessionYP_001446119 
Protein GI156975212 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAAG GAGCAGTTAT GTCTGCATTT GCTTTTTTTG GTGCGCTCGA GATAGGTCTT 
ATATATGGCT TAGTTGCTTT GGGCGTCTAC CTTACGTTTC GCGTTCTTGA TTTCCCTGAC
TTAAGTGTTG ACGGTAGTTT CCCTATGGGC GCCGCCGTTG CTGCAACCGC GATTGTTGCG
GGCATCAATC CTTGGATTGC CACCGGAATG GCCGTGATTG CTGGTAGCAT GACTGGGTGG
GTGACCGCCT TTCTCGCGGT TCGTTGTGGC ATTCTTCATC TACTTGCTTC CATTCTTACC
ATGATTGCGG CGTTCTCTAT CAACATTCGC ATCATGGGTA AGCCGAACAT GGCGCTGCTT
GGGGAAGACA CTATTCTCAC CCCGTTTGAA GCGATGGGGG ACGCTATGTA CATCCGGCCT
TTGGTGGTTG GTGTGCTGGT CTTACTGTCC GCTCTGTTTG TTGTACACCT CCTTAACAGC
GACTTTGGCT TAGGGTTAAG AGCAACGGGA GTGAACGCCC GAATGGTTGC TGCGCAAGGG
GCTAGTACTG GCTTTTACAC CTACTTTGGC TTGGCGCTGT CTAACGGGTT TGTTGGTTTT
GCTGGAGCCT TGTTTGCTCA GACCAACAGC TTTGCCGATG TCACCTCTGG CGTGGGCACC
ATCGTAGTTG GTCTTGCGGC GGTTATCCTT GGGCAAACCC TCATCCCAGG GCGCAAAATC
TGGGTCGCGG TTTGTGCGGT GATTATTGGC TCGGTACTTT ATCGCCTCGC AGTCGCGTTT
GCCCTGAGTT CAGGCATGTT TGGTCTACAA GCTTCGGATC TAAACTTGGT TACAGCTGTG
CTCGTTGCGG TGGCGTTGAT TGCGCCGAAA TTGAAACAGA GTATGAAGGC GAAACAACGC
TTGAACAATG CTAAGCAATC GACATCAAAA AATGGTTCAG GAGAGGCACT ATGA
 
Protein sequence
MQKGAVMSAF AFFGALEIGL IYGLVALGVY LTFRVLDFPD LSVDGSFPMG AAVAATAIVA 
GINPWIATGM AVIAGSMTGW VTAFLAVRCG ILHLLASILT MIAAFSINIR IMGKPNMALL
GEDTILTPFE AMGDAMYIRP LVVGVLVLLS ALFVVHLLNS DFGLGLRATG VNARMVAAQG
ASTGFYTYFG LALSNGFVGF AGALFAQTNS FADVTSGVGT IVVGLAAVIL GQTLIPGRKI
WVAVCAVIIG SVLYRLAVAF ALSSGMFGLQ ASDLNLVTAV LVAVALIAPK LKQSMKAKQR
LNNAKQSTSK NGSGEAL