Gene VIBHAR_02923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02923 
Symbol 
ID5555238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2944701 
End bp2946788 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content44% 
IMG OID640908405 
Producthypothetical protein 
Protein accessionYP_001446103 
Protein GI156975196 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TGCTCTTAAT CATTGCCATC CCAATTGTGG CGATTTTGGC TGTTATTTTA 
GGGTTAGTGA TTTTTGTTAA TCCAAACCAA TTTAAACCAC TGATAGTGGA ACAAGCTCAA
AAGCAAACCG GCTTAGAACT CGTTATTGAC GGGGACATTA GCTGGCAGTT TTTCCCATCA
ATTGGCTTCG AGCTGGGCCG CACTGAATTA AGAAATCCAC AAGGCTTCAG CCAACCTAAC
CTGTTTAAAG TTGAAACGGT CGGCGTAGAT GTGTCTGTTA CTCCTTTGTT CAGTAAACAA
CTGGAAATTG GCAATGTCAC TCTTGACGGT GCTGAGTTCT ACCTTGAAAC GCTGAAAGAT
GGTACCAAGA ACATTGATGC GCTAACCAAA GCACAAACTC AGCAAGCAGA AAAAAACACG
GAAGCAACGC CAGAGCAAGC GGCAGACTCT CAGAGTACGG CTTCTGATTG GACGATCAAT
CTAGCTGGCG TCACCATCTC TAATGGCTAT GTTGAAATCC AAGACAAGCA AGCGGGTAGC
GATACTAAGC TGTCTGATAT TTCTTTAAAC CTTTCTCAGT TTGCCTTTGA TAACTGGGCA
ACGGCAGACT TCGGCGTGAA AGGTGAAATG AATGACCAGA CGTTTACAGC GCAAGGTAAA
GCGGATTTCA AACTGGCGAA AGGTTTGGCT AGCTACGCTC TGAAAAACAT CAACTTTGAT
GCAACTTACC GCGATCCTGC CAACAAAATT GAATCTGCGA CCATTGGTTT AGAGACGTTC
GAATTCGATA AAGCAAACAA CCTAAGCTAC GCATTGAAAG GCGAAGCTGG TGGCATGAAG
CTTGATATGC AAGGTGGCGG TGAGCTAAAC GTCGATAAAG CTATCAGCAA AGTGCAGTTG
AACAAGTTGA CGTTGAACTC AACGTTTGAG GGAGATGCGC TTCCACAATC ACCAATGAAA
GTCGATATGG CCTCAGATCT CTCTTTCGAT CTTACTAAGA GTCACTTGAG TTTTGTGTTG
GAAAAGCTAA CAGCAAACGC AATTGCATTG GATGGCAAAG CGGATGTGAC TTTGGGTGAG
ATTCCGAAAG TACGCTTTGC TGTGCACAGT CCTAACATCG ACTTGGATGA ATTCCTTGGC
TTGAACCAGC AGGCTTCAGC GGGAGGCAAA TCAGCATCAG ACGGCAACAG TGCTCCTGCT
GGTCCTGAAG TTGAACCAGA CCTTTCTGCA CTAAAAACGC TTGATGTGAA GGGTGATATT
AAGATTGATA AGTTCAAGGC CGCTAACGCG AAGATGGAAG CGGTAAAAGC AAGCTTCTCT
ATCAATCGCG GTGTGTTCGA TCTGACTTCA TTCAGCTCTA AGTTGTACCA AGGTACGATC
ACTGCAACCG CTAAGCTAGA TGCACGTAAA TCACCAGCAA CTTACTCAGC GAAGAAATCA
ATTAAAGGTG TCCATATCCA ACCATTGTTG ATCGATGTGG CAAACAACGA CATGTTGGAA
GGTACAGGCA ACATTGATGT GAACGTTAGT GGTAAGAGTC TAACGCCAAC AGGAATCAAG
AAGAACCTGG TCGGCACTGT CGTGATCAAT TTTGCCGATG GTGCTGTGAA TGGCATCAAC
GTTGCTCAAT TGATTCGAGA AAACTACGCA CGATTAAAAG GTCAAAGCCT AGAAGGCACG
GATGAAGTTA AGAAAACAGA CTTTAGTGCC ATGACGGCAA CGTTGAAGCT GAACAAAGGT
GTGGTTTCTA CCGATAACAT GAAAGCGCAG TCTCCACTTC TTCGCGTTCG TGGTAAGGGC
AAAGTGAACT ACTTAAACGA AACGGTCGAC TTCACTATTA GCACTTCGAT TGTGGGCTCG
TTAGAAGGCC AGGGTGGTAA GAACATTGAT GAACTGAAGG ACATCACTAT TCCTATCAAC
GTTTCTGGTA AGTGGGCTGA TCCTAAATTC AAGCTGGTTT TCGATGACGT ATTGAAGCAA
AAAGCACAGA AAGAAATTGA CCGTGGTGTA GACAAGCTAA CGGACAAGAT TAAGGACGAG
AAAACCAAAG AAGCCGTAGA TGGTTTGTTG AAGAACTTAT TTAAATAA
 
Protein sequence
MKKLLLIIAI PIVAILAVIL GLVIFVNPNQ FKPLIVEQAQ KQTGLELVID GDISWQFFPS 
IGFELGRTEL RNPQGFSQPN LFKVETVGVD VSVTPLFSKQ LEIGNVTLDG AEFYLETLKD
GTKNIDALTK AQTQQAEKNT EATPEQAADS QSTASDWTIN LAGVTISNGY VEIQDKQAGS
DTKLSDISLN LSQFAFDNWA TADFGVKGEM NDQTFTAQGK ADFKLAKGLA SYALKNINFD
ATYRDPANKI ESATIGLETF EFDKANNLSY ALKGEAGGMK LDMQGGGELN VDKAISKVQL
NKLTLNSTFE GDALPQSPMK VDMASDLSFD LTKSHLSFVL EKLTANAIAL DGKADVTLGE
IPKVRFAVHS PNIDLDEFLG LNQQASAGGK SASDGNSAPA GPEVEPDLSA LKTLDVKGDI
KIDKFKAANA KMEAVKASFS INRGVFDLTS FSSKLYQGTI TATAKLDARK SPATYSAKKS
IKGVHIQPLL IDVANNDMLE GTGNIDVNVS GKSLTPTGIK KNLVGTVVIN FADGAVNGIN
VAQLIRENYA RLKGQSLEGT DEVKKTDFSA MTATLKLNKG VVSTDNMKAQ SPLLRVRGKG
KVNYLNETVD FTISTSIVGS LEGQGGKNID ELKDITIPIN VSGKWADPKF KLVFDDVLKQ
KAQKEIDRGV DKLTDKIKDE KTKEAVDGLL KNLFK