| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02918 |
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| Symbol | |
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| ID | 5554047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 2936837 |
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| End bp | 2939944 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640908400 |
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| Product | ribonuclease E |
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| Protein accession | YP_001446098 |
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| Protein GI | 156975191 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TGTTAATTAA CGCAACTCAA AAAGAAGAGT TGCGTGTCGC TCTGGTTGAT
GGCCAGCGAC TTTTCGATCT TGATATCGAG AGTCCAGGTC ATGAATCTAA AAAAGCGAAT
ATCTACAAAG GACGTATCAC ACGTATCGAA CCAAGCTTAG AAGCCGCATT TGTTGACTAC
GGTGCTGAGC GTCACGGTTT CCTTCCTCTT AAAGAAATTG CCCGCGAATA CTTCCCTGAA
GGTTACACTT ACCAAGGCCG TCCTAGCATT AAAGAAGTGC TAACAGAAGG CCAAGAAGTG
ATCGTGCAAG TGGAAAAAGA AGAACGTGGT AGCAAGGGCG CAGCTCTAAC TACTTTCATC
TCTCTTGCGG GTAGCTACCT TGTTCTTATG CCTAATAACC CTCGTGCCGG CGGTATTTCT
CGTCGTATCG AAGGTGATGA GCGTACACAA CTTAAAGCTG CACTAAGCAC TCTGGAATTG
CCTCAAGGCA TGGGCCTGAT TGTTCGTACT GCTGGCGTTG GCAAGAGCGC AGAAGAACTA
GAGTGGGATT TGAACGTACT ACTTAACCAC TGGAGCGCGA TTAAGGGCGC GGCAGATTCT
AACCCTGCCC CATTCCTAAT CCACCAGGAA AGTAACGTAA TCGTTCGTGC AATCCGTGAC
TACCTACGTC GTGATATCGG TGAAATCCTA ATCGACAGCA ACACCATTTA TGAGCGTGCT
AAAGAGCACA TCAAATTGGT TCGTCCTGAT TTCATCAGCC GCGTTAAAAA ATACGATGGC
GAAGTACCAC TGTTCAGCCA CTACCAAATC GAAAGCCAAA TTGAATCGGC TTTCCAACGT
GAAGTGCGCT TACCATCTGG TGGTTCTATC GTAATCGACC CAACAGAAGC ACTGACTTCT
ATCGATATCA ACTCTGCTCG CGCAACGAAA GGCGGCGATA TCGAAGAAAC AGCACTTAAT
ACCAACCTAG AAGCAGCAGA CGAAATCGCT CGTCAATTGC GTCTACGTGA CCTTGGTGGT
CTGGTTGTTA TCGACTTCAT CGATATGACG CCAGTACGCC ACCAGCGTGA AGTTGAAAAC
CGTCTACGTG AAGCCGTTCG TCTAGATCGC GCCCGCGTTC AAATCGGTCG CATTTCTCGC
TTCGGTCTTT TGGAAATGTC TCGTCAACGT TTGAGCCCTT CTCTAGCGGA AGCAAGCCAC
CATATTTGTC CTCGTTGTAC GGGTACAGGT GTGGTTCGTG ACAACGAGTC TCTAGCACTT
TCTGTTCTTC GTCTTATTGA AGAAGAAGCG CTTAAGGACA ACACAGCACA AGTACTTGCT
GTGGTACCTG TGCCAATCGC GTCTTACCTT CTAAACGAAA AACGTCGCTC TGTGAACCAC
ATTGAACGCA CTCAAGAAGT GAAGATCACT GTTGTTCCTA ACTCAGACAT GGAAACGCCT
CACTTTGAAG TTATCCGTGT TCGTGAGGGT GAAGAGTTCG ACCTGCTTTC TTACCTACTT
CCTAAGAAAC TGGAAGCGAT GAAAGAAGCA GAAGGCAAAG AGCCTGCAGA AGTTGATATT
AAGCCTAAGC GCATCGAAGA GCCTGTACTG AAAGGTTTCG CAGCGCCAAC GCAAACTGCA
CCAGCTCCTG CAGCAACGTC TAAACCTGCA CCAGCTGCGA AGAAGAAAGA AGCTGCGCCA
CAGGAAGAAA AACCAGGTCT AATCAGCCGT ATGTTTAAAG CGCTTGGCAG TTTCCTATTC
GGTGGTTCTG AAGAAGTAAA AGAAGAGCCT AAGAAAGAAG AGAAGAAGCC AAACCGCGAT
AACAAGCGCA ACAAACGTGA CCGCAACGAT CGTCGTCGCA ACAACAACCA ACGCGATAAC
CGCGAAGGTC GTGACAACCG CGATAACAAA CGTCGCCGTA AGCCACGTGA AGAGCAAGCG
ACTGAGCAAA ACGAAACGCA ACAGCAGCCT AATAAGCAGC AAAACCGCAA CCAGAAACGT
AAGCCTAGAG CTCAACAAGC TGAAAAAGCA CAAGAGCCAA AAGCAAATGC GAAGGTAGCG
GAAAAAGGTC TGCAACTTGC CGCTGAAGCA CGCACTGGTA CAGAAGCGAA GCCGGAAGAA
AGCAAAGCGA AGTCAAACGC GAAAGCAGAG AAAGTGAAAG AGCGCCGTCA GCGTCGCAAA
CTGAACAAAT CTGTACGCGT TAAAGATCAG CAAGCGGCAG AGAAAGCTGA ACAGGAAGTA
CCTGTACAAA CAATCGTTGA AGCGGTTGAA GCACCTGTTG AAAAGCCAGT TGAGGCAGCA
GCAGAAGCAC AACAAGACAA CAAAGCAGAA TCTAAACAGC GTCGTAACCG TCGTTCACCA
CGTCACCTAC GTGCAAGTGG CCAACGTCGT CGTCGCGGTC GCGATCGTCG CCCTAACCCA
TTCCGCCTAC GCAAAGGTGG TGTAGCCTCT CCTGAGATGG CAATGGGTAA AGTAATGCCA
CGCTACATTC CAAAACCAGC GCCTAAGAAG GAAGAGCGAG TGAAGGAAGA AGCAGCGGTT
GTTGCAACAG CAGTACCTGC AATCCAAGGT GGTTTTGCTT GTCCTGAAAT GGCGATGGGT
AAAGTGATCA TTCGCCGTGA GCAACCTGCA GTCGTTGAAG CGCCAGTAGT TGAACCAAAA
GTTCAACAAC CTGTAGAAAC GAAAGTAGAA GCTCCAGTTG TAGAAACACC GGTTGCAGCA
GCACCAGTAG TTGAAGCAGC AGTTGTAGAG CAAGCTGAAA CTGTAGCAGC AGAAGCGACA
CCAGTTGAGC CAATCGTAGA AGCACCTGTA GTTGAAACAA CTGAAACTGC AGTAGCAGAA
GCGGCGCCAA CTCAAGAGCC AGTAGTCGAA GTAGTAGCAG AAACTGTAGA ACAAGTTCCA
GCGGAAGCGA AAGTAGAAAC ACCAGAGCCT AAAGCAGAAG TTATCAAGGT AGCGACCAAG
CCACGTGCGA TCGCACCGAT GACAAAAGCG CCGGGTCCTC AAGAGCTTCG CGAAATCACC
GTTACAGCAG CACCGTTTAA AGCTGAACGC TACGCACCGA AAGGCGCAGG TAGCCAAGTA
GCAACAAACC GTGCGTCTGC AGGTATGACA AAGCCAAACT TTAGCTAA
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| Protein sequence | MKRMLINATQ KEELRVALVD GQRLFDLDIE SPGHESKKAN IYKGRITRIE PSLEAAFVDY
GAERHGFLPL KEIAREYFPE GYTYQGRPSI KEVLTEGQEV IVQVEKEERG SKGAALTTFI
SLAGSYLVLM PNNPRAGGIS RRIEGDERTQ LKAALSTLEL PQGMGLIVRT AGVGKSAEEL
EWDLNVLLNH WSAIKGAADS NPAPFLIHQE SNVIVRAIRD YLRRDIGEIL IDSNTIYERA
KEHIKLVRPD FISRVKKYDG EVPLFSHYQI ESQIESAFQR EVRLPSGGSI VIDPTEALTS
IDINSARATK GGDIEETALN TNLEAADEIA RQLRLRDLGG LVVIDFIDMT PVRHQREVEN
RLREAVRLDR ARVQIGRISR FGLLEMSRQR LSPSLAEASH HICPRCTGTG VVRDNESLAL
SVLRLIEEEA LKDNTAQVLA VVPVPIASYL LNEKRRSVNH IERTQEVKIT VVPNSDMETP
HFEVIRVREG EEFDLLSYLL PKKLEAMKEA EGKEPAEVDI KPKRIEEPVL KGFAAPTQTA
PAPAATSKPA PAAKKKEAAP QEEKPGLISR MFKALGSFLF GGSEEVKEEP KKEEKKPNRD
NKRNKRDRND RRRNNNQRDN REGRDNRDNK RRRKPREEQA TEQNETQQQP NKQQNRNQKR
KPRAQQAEKA QEPKANAKVA EKGLQLAAEA RTGTEAKPEE SKAKSNAKAE KVKERRQRRK
LNKSVRVKDQ QAAEKAEQEV PVQTIVEAVE APVEKPVEAA AEAQQDNKAE SKQRRNRRSP
RHLRASGQRR RRGRDRRPNP FRLRKGGVAS PEMAMGKVMP RYIPKPAPKK EERVKEEAAV
VATAVPAIQG GFACPEMAMG KVIIRREQPA VVEAPVVEPK VQQPVETKVE APVVETPVAA
APVVEAAVVE QAETVAAEAT PVEPIVEAPV VETTETAVAE AAPTQEPVVE VVAETVEQVP
AEAKVETPEP KAEVIKVATK PRAIAPMTKA PGPQELREIT VTAAPFKAER YAPKGAGSQV
ATNRASAGMT KPNFS
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