Gene VIBHAR_02830 details

Gene Information

• Locus tag: VIBHAR_02830
• ID: 5553269
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 2852356
• End bp: 2852970
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640908312
• Product: hypothetical protein
• Protein accession: YP_001446010
• Protein GI: 156975103
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2176] DNA polymerase III, alpha subunit (gram-positive type)
• TIGRFAM ID: [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTCAAG CTAACTCCGT TGTCGTACTC GACTTTGAAA CCACAGGTCT GTCTCCGAAT 
ATGGGGGATC GCGCGATTGA AATCGGTGCG GTTAAGATCG TCGATGGTGA GGTGGTCGAT 
AGTTTTCAGC AACTTATGAA TCCTGGCTTT CGTGTGAGCT CATTTATTGA GGGCTATACA 
GGTATAACCA ATAACATGCT GCGCACAGCG CCTAACTGCG ATGAAGTGAT GGCATCGTTC 
AGTGAGTTTA TTGCAGGTGA GAATCTTATC GCGCACAACG CGTCGTTCGA TAAGCGCTTT 
CTTGATGCAG AGCTAGAGCG AATCGGCTGT GGTTATTCCG GTGAGTTCGC GTGTTCTTTA 
TTGGTAGCAC GACGCCTGAT TCAAGATGCG CCGTCACACA AGTTGGGTGA GTTGGTTCGT 
TACAAGAACA TTGAAAACGA CGGTGTGTTC CACCGCGCGT TAGCCGATGC ACAGGTAACG 
GCAAAACTGT GGTTATTGAT GGTAGAAGAG CTTGAGCAAT CGGGCATTGT CGCGCCAAGC 
TTCAAGTTTA TGCAGACGGT AAGTAAGACA GCAAAAGGAA AAGTGGACCA GCTACTGGCT 
AAAAGCCGCG CTTAA 

 

Protein sequence

MPQANSVVVL DFETTGLSPN MGDRAIEIGA VKIVDGEVVD SFQQLMNPGF RVSSFIEGYT 
GITNNMLRTA PNCDEVMASF SEFIAGENLI AHNASFDKRF LDAELERIGC GYSGEFACSL 
LVARRLIQDA PSHKLGELVR YKNIENDGVF HRALADAQVT AKLWLLMVEE LEQSGIVAPS 
FKFMQTVSKT AKGKVDQLLA KSRA