Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02788 |
Symbol | |
ID | 5556400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2815538 |
End bp | 2817634 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908270 |
Product | hypothetical protein |
Protein accession | YP_001445969 |
Protein GI | 156975062 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAACA GTATACGTAC TCGAATCGCA GTCAGTGCGG GCGGTGCAAT GGCGTTCACT TTATTGATTG CAATGGGTAT GACTACCGAT GCATTTACTG ACGTGAACAA GCAAGTGAAC GAGAAAGTAA AAGCGCAATT AACGGATGCG ACCAGTACCG ATCTGCAAAA CACCGCGATT CAGCAAGGTC TGAATATTGC GAACCAGCTT GATCCTGTAC TTGCAAACTT GAAGCAAGTA CGTTCGATCA TCGAGTTGAG CTCAGAAACT AACGCAAGTG CAGACCTTAT TGTTAAACAG TTTACTGCCG CGCTAGAAGC ACAAAACAAA GCGGTATTTG CAGGCTACAT GGTTTGGCAA GATAAAACTT GGCCACAGCA AGTGACGCTT AATCCTGAAG ACGGTTTTAA CAGCCAAGGT TACCTTGCGC CTTTCTTCTC GCCAAATGAT CAAAACAGTT TTGATGCAGT GGCGATGGAA AGTTTTAGCA ATACAGAGCT AAACAGCAGT GGCGAACGCA AAGACGATTG GCACTTAATG CCTTACGAAA CGGGCAAAAC TTTCGTCATG GAGCCGTACT TTTATCCTGT ACGAGGCAAG CAAGAGCTGA TTACAACCAT CAGCCAACCG ATAAAACAAG ATGGCAAGAT CATCGGTTCG CTTGGTTTTG ATTTGTCTCT GTATGAACTG CAAAACCAGA GTGAACAATC GGCGCGTAAC TTGTTTGATG GCAAGGGTAA AATTCTTATC ACCTCTTGGA AAGGTATTAC CTTGGCAAAC AGCCGAGATG GTGCAATGGT GGGTAAGAAA GTTTCTTCAG AGCTGGCTGC CGAGTGGTCG AACATTCAGT CGGTTGCGAA GCGCGATGGT GCTGGCCTTA TCGCTTTTGA TGGTGATGAG TATGCGATCA CTGCTATCGA TACCAGTGAT GCGCCATGGG TAGTCATGGT GTCGGTTCCC AGTAGTCACC TCACAAAAAG CGTCGACGAG TACCAGCAAT GGAGTGATGG GCAGAGTTCG GAAGCGCTTG AAAAAGGTGT GTGGGCGGGG ATCTTCGCTG CTATTTTAGG CATTGCCGCG ATGGCATTCA TTGCAAACTC GCTTGGCAAA GTGTTGAACA ACTTGGTTGA ACGTTTTAAA GACGCGGCGC AAGGCGAGGG CGATCTGACT TACCGTATTG AAGTGAAAGG TAAAGATGAA ACCGCGCAAC TGGCACATTG GTTCAATACC TTCTTGTCGC GTATGCAAGA GATGCTATTG ACCGTAATGG CAACCGCAGA TCAAGTGGAT AAGAACGCAA CAGAAGGCCA AACACGTGCT GCGGCTTCTC GCGACCAATT AAATGCTCAG GTTAATGAAG TGAACTCGTT AGCAACGGCG ATCAATGAAA TGAGTGCAAC CGCACAGGAA GTTGCGAACT CTGCGGTTCA AGCAGCCGCT GCGGCAAGCC AAGTACAAAG CAATAGCCTG AACGGCATGA CGCGTATGGA TAACGCTGCG AGTGCGGTGG ATAGCTTGGC AATGCAAGTC AACGATGCGC AGCAACAAAC GCAGAATCTG GTGGATTCCA GCACGGCAAT TCAGGGCATT TTGAGTGAAA TTGGCGGTAT TGCTGAGCAA ACCAACTTAC TGGCGCTTAA TGCGGCGATT GAAGCTGCAC GAGCAGGTGA GGCTGGCCGA GGTTTCGCGG TGGTTGCTGA TGAGGTTCGT AACCTTGCAA ACCGTACACA AGGGTCGACG GAAGAGATCC GCGCAATGCT GGCTCGACTA GAGCAAGAAA CGCAATCGAT CGTTGTGCTG ATGGAGCAAA GCCAAAAACA AGCGACCGAT ACTAAGGGCG AGACGCAAGC GGCACATCTA GCGCTGTCTG AAATCAACCA AGCAATTGAA GTCATCAACG ACATGAACAA CCAAATCGCT TCGGCAGCAG AAGAGCAGAG CTCTGTATCG GAAGAGATCA ACCGTAATGT GGTGATCATC AACGATACCG CAGTAGAGGT GATGGACACC ATGACGTCGT CAGTAGAGAT CAGTAACGAA CTTACCGTAA AAGCGAGCGA TCTTCACGGT GAGCTGAGTA AGTTTAAGCT GTCTTAA
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Protein sequence | MFNSIRTRIA VSAGGAMAFT LLIAMGMTTD AFTDVNKQVN EKVKAQLTDA TSTDLQNTAI QQGLNIANQL DPVLANLKQV RSIIELSSET NASADLIVKQ FTAALEAQNK AVFAGYMVWQ DKTWPQQVTL NPEDGFNSQG YLAPFFSPND QNSFDAVAME SFSNTELNSS GERKDDWHLM PYETGKTFVM EPYFYPVRGK QELITTISQP IKQDGKIIGS LGFDLSLYEL QNQSEQSARN LFDGKGKILI TSWKGITLAN SRDGAMVGKK VSSELAAEWS NIQSVAKRDG AGLIAFDGDE YAITAIDTSD APWVVMVSVP SSHLTKSVDE YQQWSDGQSS EALEKGVWAG IFAAILGIAA MAFIANSLGK VLNNLVERFK DAAQGEGDLT YRIEVKGKDE TAQLAHWFNT FLSRMQEMLL TVMATADQVD KNATEGQTRA AASRDQLNAQ VNEVNSLATA INEMSATAQE VANSAVQAAA AASQVQSNSL NGMTRMDNAA SAVDSLAMQV NDAQQQTQNL VDSSTAIQGI LSEIGGIAEQ TNLLALNAAI EAARAGEAGR GFAVVADEVR NLANRTQGST EEIRAMLARL EQETQSIVVL MEQSQKQATD TKGETQAAHL ALSEINQAIE VINDMNNQIA SAAEEQSSVS EEINRNVVII NDTAVEVMDT MTSSVEISNE LTVKASDLHG ELSKFKLS
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