| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02749 |
|---|
| Symbol | |
|---|
| ID | 5555770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2771813 |
|---|
| End bp | 2774263 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640908231 |
|---|
| Product | DNA polymerase II |
|---|
| Protein accession | YP_001445930 |
|---|
| Protein GI | 156975023 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTCA GCAGCGCTCT TTTACTGGTT ATTTTTACAG TTCTTAATGA TAGAATACGT
GCTTCATTGA TTTACAAGGT TTCTCTATTG AATATCCAAC AAGGCTTCCT TCTCACTCGC
CAAGCCCGAG ACATCAAAGG TCAAACTCAG ATTGAGCTTT GGCTTTCGAC CGAGAATGGT
CCCACCCAAT TGTTGATTCA AGGAGAAAGG CCCGTTTTCT TCATTGAACA GGCGCACATC
GAACAAACCA AGCAACTTGC CAACTCTAAA CTCATTGCCG TCGACATTCG CGCGCTTGAG
CTAAAGAACT TTCAACTAAC ACCTTTAGCT GCATGTTACA CGCAAACGAC AAAAGACGCG
TTCGCTCTAC AAGATGAGCT CAAGCAACAT GACATCGTTC ATTTCGAAGG CGACGTGCGT
CTTGCCGACC GCTATTTGAT GGAACGTTTT ATTAAAGGCA GCATGGAGTT TACCGGCAAC
CAGCAGCCAC GAAACGGCTT CCAACGCATT CAAAATGCAA AGTGCCGTAC AGGTGAATAC
CAGCCGAAGC TACACGTGGT GTCCTTAGAT TTAGAATGTT CAGAAAAAGG CATTCTCTAT
TCGATTGGTT TAGACAGCCC TGTCGATTCA CGAGTGATCA TGATTGGTGA GCCGGAACCA
GCAGAGACAG CAATTCAATG GGTGAAAGAT GAAAAGGCAC TACTCGATGC TTTGATCGCT
TGGTTCAAGC AGTTCGACCC AGACGTCATT GTTGGCTGGA ACGTGATCGA CTTCGATTTC
CGCCTGCTAC ACAAGCGCGC TGAGTCGCAC AACATGAAGC TGATGTTAGG CCGCGCTGAC
CAACCGAGTT TCTTCCGCAG CTCCGCGCAA AGCCAACAAG GTTTTATCTC AATCCCTGGT
CGTGTGGTGC TGGATGGTAT CGATACGCTC AAAACCGCGA CATACCATTT CCGCTCTTGG
TCACTTGAGT CTGTTTCACA AGAACTCCTA GGCGAAGGTA AAGAGATTCA TAACGTTCAT
GATCGAATGG ACGAAATCAA TCGCATGTAC CGTTCAGACA AGCCGTCTCT CGCTAAATAC
AACTTGCAAG ACTGTGTGTT GGTCAACAAG ATTTTTGACC ACACTCACCT ACTCGACTTC
GCAATCGAAC GCTCTCGCCT AACGGGTGTG GAACTGGATC GCGTCGGGGG CTCAGTAGCA
GCTTTTACTA ATTTGTATTT GCCGCAAATC CACCGAGCTG GCTATGTTGC GCCAAATCTC
CATCCCGAAA ATTGGATAGC TAGCCCAGGC GGCTATGTGA TGGACTCGAT CCCAAACCTT
TACAACTCGG TATTGGTACT CGATTTTAAG AGCCTTTACC CTTCTATTAT TCGCTCATTC
TTGATCGATC CTATGGGTTT AGTCGAAGGC TTACAGCTTG AAATCGGCAA GGCAGACAAT
GAAGCCGTAC CGGGGTTTCG TGGTGGTCAG TTCCATCGCA GCAAACACTT CCTGCCAGAG
ATGATCGAAA AGCTCTGGGC AGCGCGCGAT GTCGCAAAGA AGAACAACGA AAAAGCCTTC
TCGCAAGCAA TCAAAATCAT CATGAACTCT TTTTATGGTG TGCTTGGTTC TTCTGGCTGT
CGTTTCTTTG ATACCCGCCT TGCTTCCAGT ATCACTATGC GTGGCCACGA AATCATGAAG
CAAACCAAAG TTCTGATTGA GGACAAAGGT TATCAAGTGA TCTATGGCGA CACCGATTCA
ACCTTTGTGT CTTTAAATGG CGCATACAGC CAAGCAGATG CCGATAAAAT TGGTAATGAA
CTGGTCGACT ACATCAACCA ATGGTGGAAT GACCATCTGC GCAGTGAGTA CAACCTCAAC
TCGATTCTTG AACTCGAATA CGAAACCCAT TATCGCAAGT TCCTGATGCC AACCATCCGT
GGTGCGGAAA CGGGCTCTAA GAAACGCTAC GCAGGTTTGA TTGGTGAAGG CGAACAAGAA
CGCATTATCT TCAAAGGATT AGAAAGTGCA CGCACCGACT GGACACCACT GGCACAGCGA
TTCCAAAATA CTTTGTACCA AATGATCTTC CACGGCGAAG ATCCAAGTGA TTACGTGCGA
GAGATGGTCG AAAAAACCAA TAATGGTGAG TTTGATGATC AGCTGGTATA TCAAAAGCGC
TTGCGCCGTA AACTCCACGA ATACCAAAAG AATATCCCGC CACAAGTACG TGCTGCGCGC
TTAGCCGATG ACATCAACGC TAAATTAGGC AGACCATTGC AGTACCAAAA CCGTGGTCGA
ATCGAGTACT TGATTACCGT AAACGGGCCA GAGCCACACG AATACCGCAA TAGTCCTATC
GACTACCAGC ACTATATTGA TAAACAGTTG AAGCCAGTGG CCGATGCGAT TTTGCCGTTT
ATTGGTACAG ACTTCGAGCA GTTATCTGCG CCGCAGATGG GGCTGTTCTA A
|
|---|
| Protein sequence | MKFSSALLLV IFTVLNDRIR ASLIYKVSLL NIQQGFLLTR QARDIKGQTQ IELWLSTENG
PTQLLIQGER PVFFIEQAHI EQTKQLANSK LIAVDIRALE LKNFQLTPLA ACYTQTTKDA
FALQDELKQH DIVHFEGDVR LADRYLMERF IKGSMEFTGN QQPRNGFQRI QNAKCRTGEY
QPKLHVVSLD LECSEKGILY SIGLDSPVDS RVIMIGEPEP AETAIQWVKD EKALLDALIA
WFKQFDPDVI VGWNVIDFDF RLLHKRAESH NMKLMLGRAD QPSFFRSSAQ SQQGFISIPG
RVVLDGIDTL KTATYHFRSW SLESVSQELL GEGKEIHNVH DRMDEINRMY RSDKPSLAKY
NLQDCVLVNK IFDHTHLLDF AIERSRLTGV ELDRVGGSVA AFTNLYLPQI HRAGYVAPNL
HPENWIASPG GYVMDSIPNL YNSVLVLDFK SLYPSIIRSF LIDPMGLVEG LQLEIGKADN
EAVPGFRGGQ FHRSKHFLPE MIEKLWAARD VAKKNNEKAF SQAIKIIMNS FYGVLGSSGC
RFFDTRLASS ITMRGHEIMK QTKVLIEDKG YQVIYGDTDS TFVSLNGAYS QADADKIGNE
LVDYINQWWN DHLRSEYNLN SILELEYETH YRKFLMPTIR GAETGSKKRY AGLIGEGEQE
RIIFKGLESA RTDWTPLAQR FQNTLYQMIF HGEDPSDYVR EMVEKTNNGE FDDQLVYQKR
LRRKLHEYQK NIPPQVRAAR LADDINAKLG RPLQYQNRGR IEYLITVNGP EPHEYRNSPI
DYQHYIDKQL KPVADAILPF IGTDFEQLSA PQMGLF
|
|---|
| |