| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02678 |
|---|
| Symbol | |
|---|
| ID | 5555743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2699126 |
|---|
| End bp | 2700337 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908161 |
|---|
| Product | putative ABC transporter solute-binding protein |
|---|
| Protein accession | YP_001445864 |
|---|
| Protein GI | 156974957 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATAC AGAGCTCCAA AATGAAAACA AAGATAAATA AACACGGATT ACGTATGAAA
AAGCTACTTA GCACCATTGG CATTTTAGCC ACCACTTTTG CCACCTCCTC TTTCGCCGCT
TCTCACTCAG AAGAATGGCA AAAAATCGAA CAACAAGCTG ACGGTCAAAC CGTTTATTTT
CATGCTTGGG GTGGCAGCCA AGAGATCAAC CGCTATCTCC ATTGGGCACG CAAAGAGCTT
AAATCTCGCT ACAACGTGAC GCTTAATCAC GTCAAAGTCA CTGATATTTC TGAAACCACT
ACTCGTCTTA TTGCTGAAAA AGCCGCAGGA AAAAACAGCG GCGGCAGTGT TGATATGGTT
TGGATTAATG GTGAAAACTT CAAATCAATG AAAGACAACC AACTGCTGTT TGGTCCTTTC
GTAGAAGGCT TACCAAATTG GCAATATGTA GATAAAACTC TACCTGTTGA CGTCGACTTC
TCAGAGCCAA CCGATGGCCT AGAAGCACCT TGGGGTGTCG GCCAACTCGT ATTTATTCAC
GATGAAGAAA CTCTGAATAA CCCGCCTCGC TCTTATGCAG AAATGCTGAG TTACGCTAAA
GCGTTTCCGA ACCGTCTGAC TTACCCTCGC CCGCCCGAGT TTCATGGTAC CAGCTTCATC
AAGTCTCTAC TGATTGAGTT GAGTCACAAC GATCCAGTGC TGCAAAAACC AGTAACGGAA
GAATCATTTA AAGCCGTCAC ACAACCACTA TGGGCATACC TAGATGAATT CCATAAAGTG
GCATGGCGCG GTGGTAAGCA ATTTCCTGGC GGTACTGCCG AGTCCATTCA ACTGTTGGAT
GACGGTCAAA TCGACCTAGC GGTGACCTTC AACCCGAACG CGGTTTTCTC TGCGCAATCG
AGCGGCAACC TTGCAGAAAG TACGAAAGCG TATGCGATGG ATGCAGGGGC ACTGTCGAAC
ATCCACTTCT TGGCGATTCC TTGGAACGCA AATGCCAATG CAGGTGCACA AGTTGTTATA
AACTTTTTAT TAAGCCCTGA AGCGCAATCT CGCAAAGGTG ACATTAATAC TTGGGGTGAT
CCTTCAGTGC TAAGCAGTCA ATACCTAATG GGTACGGCTA AGAATACCCA GCAATTCAAA
TCTATCGAGG AGCCACATCC TAGCTGGCAA GCCGCGCTAG AAAAAGAATG GCTGAAACGT
TACGGGAATT AA
|
|---|
| Protein sequence | MGIQSSKMKT KINKHGLRMK KLLSTIGILA TTFATSSFAA SHSEEWQKIE QQADGQTVYF
HAWGGSQEIN RYLHWARKEL KSRYNVTLNH VKVTDISETT TRLIAEKAAG KNSGGSVDMV
WINGENFKSM KDNQLLFGPF VEGLPNWQYV DKTLPVDVDF SEPTDGLEAP WGVGQLVFIH
DEETLNNPPR SYAEMLSYAK AFPNRLTYPR PPEFHGTSFI KSLLIELSHN DPVLQKPVTE
ESFKAVTQPL WAYLDEFHKV AWRGGKQFPG GTAESIQLLD DGQIDLAVTF NPNAVFSAQS
SGNLAESTKA YAMDAGALSN IHFLAIPWNA NANAGAQVVI NFLLSPEAQS RKGDINTWGD
PSVLSSQYLM GTAKNTQQFK SIEEPHPSWQ AALEKEWLKR YGN
|
|---|
| |