Gene VIBHAR_02638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02638 
Symbol 
ID5555555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2655095 
End bp2657380 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content48% 
IMG OID640908123 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001445826 
Protein GI156974919 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTC TACGAAGAAA ATGGATTAGT GACCCAGCAT TTAAAATGTT TAAGAAAGTA 
TTGCCTCCAT TGTCGAGTAC TGAAAAAGAA GCAATGGAAG CGGGCAATGT ATGGTGGGAC
GCTGAGCTAT TCTCAGGCAA GCCAAACTTT ACAACGCTAC ATCATTATCC GAAGCCTGCT
CTAACGTCTG AAGAGCAAAC CTTCATGGAC AATGAGCTAG AAACGTTACT AGAAATGTTG
GATGACCAAA AGATCGTGAA AGACGATCGA GATCTTCCAC CAGAAGTATG GGAGTTTTTA
CGCAAGGAGC GTTTCTTCTC GCTGATCATT TCAAAAGAAT ACGGTGGCCG AGAGTTTTCA
GCGCTGGCTA ACTCAACCAT CGTTTCTCGC ATTGCAACGC GTAGTATCAG TGCTGCGGTT
TCAGTGATGG TTCCAAACTC TCTTGGTCCG GGTGAGCTGC TTTCTCACTA TGGTACTCAA
GATCAAAAAG ATTATTGGCT GCCGCGTCTT GCAGACGGTA CGGATATTCC ATGTTTTGCC
CTTACTGGTC CTGAAGCGGG CTCGGACGCT GGTGGTATCC CAGACCAAGG CGTTGTGTGT
TATGGCATGC ATGAAGGCGA AGAAGTTCTA GGTATCCGTG TTAGCTGGAA CAAGCGTTAC
ATCACTCTAG CACCTGTAGC AACGGTTCTT GGTCTAGCGT TTAAGCTTCA AGATCCTGAT
GGTCTACTTG GTGATAAGAA AGACGTGGGT ATCACTTGTG CGCTAATTCC TGCTGATCAC
GAAGGTGTCG AAATTGGTGA GCGTCACGAC CCACTGGGTT CTGCATTCAT GAACGGCCCA
ACACGCGGTA AAGATGTGTT TATTCCAATG GATTGGTTGA TCGGTGGCTC CGAATACGCA
GGCAAAGGTT GGCGTATGTT GGTGGAATGT CTATCGGCTG GACGAGGCAT TTCCCTTCCT
GCACTAGGCA CAGCTATTGG CCACCTAACA ACACGCACAA CTGGCGCTTA TGCTTATGTT
CGTAAGCAGT TTGGTATGTC GATTGGTAAG TTTGAAGGTG TTGCAGAGGC GATGGGGCGC
ATCGGTGGTT TAACTTACCT ACTAGAAGCG ACTCGAACGC TAACCACCAC TTCTCTAGAT
ATGAAGGAGA AGCCAGGCAT TGTAACTGCG ATTGCGAAAT ACCACATGAC GGAGATCGCT
CGTACTATCC TGAACGACTC TTTCGATATC CATGCTGGTC GTGCTATTCA AGACGGTCCA
ATGAACTACC TAGCAAAACA CTATCTAGGT ATCCCGGTCG CGATTACGGT TGAAGGTGCA
AACATTCTGA CTCGTAACCT AATGATCTTC GGTCAGGGTG CAACACGTTG TCACCCATAC
GTTCTGAAAG AGATGGAAGC GGCGGCCAAT CCTGATCCGA AAGAGGGCGC GAAAGAGTTT
GATGATCTGC TGTTCAAACA TATCAAACAC GCAATGGGTA ATACCTTTGG TGCATTGGGC
GCAGCGTTGA CTGGTTCTCG CTTCGTGAAA GCACACATGA GCGGGCCGAC GCAGCAATAC
TATAAAGATA TTACTCGCCT AAGCCGCGCG CTGGCAGTGA GTGCAGACTT CGCAATGTTG
ACTCTAGGCG GTGACCTGAA GCGCAAAGAA ATGATTTCTG CACGCCTTGG TGATGGCTTA
AGCTACTTGT ACATGGCTTC TGCTGCACTT AAGAAGTATG AAGATGAGGG TCGTCAGCAG
GGTGATTTGA ACTTTGTACA TTATGCAGTA CAACACTGCT TATACAATGC TTCGAAGTCA
TTGAATGAGG CTTACTCGAA CTTCCCGGTG AAATACGTAG GTGGCGTTCT AAAAGGCTTG
TTGTTCCCAT TGGGTAACCA CTTCAATGCG CCAAGCGACG AGCTATGTGT GAGCCTAGCA
GAAGCGATGA TGACACCAGG CGCTCAACGT GACCGACTGA CTCATCTGTG CTACATCGGC
AAAGAGGAAG ACGACAGCGT TGGCCTAATG GAACGTGCAT TCTTAGCGAT GTACGATGTG
AAGCCTCTTG AGCGTAAACT GATGAAAGCT GCAAAAGATG GCAAAGTAGC GCGTAAAGGT
CTATTGCATG ACCGCCTACA GCAAGCGTTT GAAGCCGAGG TACTGACAGA GCAAGAAATC
GACCAAATCA TGGCGGCAGA TAAGTTGCGC TACAAAGCGA TTCAAGTCGA TCACTTTAGT
CACGATTTCT CAGAAGTTCG CACCAACGTG ACGACGAAGA AATCGCACCT GAACTCAGCA
GCATGA
 
Protein sequence
MSSLRRKWIS DPAFKMFKKV LPPLSSTEKE AMEAGNVWWD AELFSGKPNF TTLHHYPKPA 
LTSEEQTFMD NELETLLEML DDQKIVKDDR DLPPEVWEFL RKERFFSLII SKEYGGREFS
ALANSTIVSR IATRSISAAV SVMVPNSLGP GELLSHYGTQ DQKDYWLPRL ADGTDIPCFA
LTGPEAGSDA GGIPDQGVVC YGMHEGEEVL GIRVSWNKRY ITLAPVATVL GLAFKLQDPD
GLLGDKKDVG ITCALIPADH EGVEIGERHD PLGSAFMNGP TRGKDVFIPM DWLIGGSEYA
GKGWRMLVEC LSAGRGISLP ALGTAIGHLT TRTTGAYAYV RKQFGMSIGK FEGVAEAMGR
IGGLTYLLEA TRTLTTTSLD MKEKPGIVTA IAKYHMTEIA RTILNDSFDI HAGRAIQDGP
MNYLAKHYLG IPVAITVEGA NILTRNLMIF GQGATRCHPY VLKEMEAAAN PDPKEGAKEF
DDLLFKHIKH AMGNTFGALG AALTGSRFVK AHMSGPTQQY YKDITRLSRA LAVSADFAML
TLGGDLKRKE MISARLGDGL SYLYMASAAL KKYEDEGRQQ GDLNFVHYAV QHCLYNASKS
LNEAYSNFPV KYVGGVLKGL LFPLGNHFNA PSDELCVSLA EAMMTPGAQR DRLTHLCYIG
KEEDDSVGLM ERAFLAMYDV KPLERKLMKA AKDGKVARKG LLHDRLQQAF EAEVLTEQEI
DQIMAADKLR YKAIQVDHFS HDFSEVRTNV TTKKSHLNSA A